Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2802 ATGCAAGCTCACACATTCTCCTTCATTTCCTCAATTGAAACTAATGAGACTGTTGATGAGTCTTCCATTTCACTCTCACTTGGCCCTCCAGGGACACACCACAAAACAAATTACTCTGCTACTACTTTGCATCACCATCACCACCAAAAGCAAAACCTTACCATTGATGATGAACAGAGTGGTGTAACAGTTGCACTTCACATTGGCCTTCCCACAACCATTTCACAAAACAACACACCTATCAACAAACCTGATCTTCACTTGGCTTCAGCTCCGTTTCAAGGTCAATATTGGATTCCTTCACCTGCTCAAATCCTCATTGGACCAACACAGTTCTCTTGCACAGTCTGCAATAAAATGTTCAACCGTTTCAACAATATGCAGATGCATATGTGGGGACATGGATCACAATACAGGAAAGGGCCAGAATCTTTGAGAGGAGTAAAACCAGCTTCATCAATGTTAAGGCTTCCTTGCTATTGCTGTGCAGAGGGATGCAAGAACAACATTGAGCATCCAAGGTCAAGGCCACTCAAGGATTTCAGGACACTTCAAACACACTACAAGAGGAAGCATGGAACAAAGCCATTTGGTTGTAGAAAGTGTGGGAAACCCTTTGCAGTGAGAGGTGACTGGAGAACACACGAGAAAAACTGTGGAAAGCTTTGGTTCTGTATCTGTGGCTCTGATTTCAAACACAAGAGATCCCTCAAAGACCATGTTCGTGCTTTCGGTGATGGTCACGCTCCGCACACCGTCGACAGTTGTGAAGATCAGGAAGTGTCCTTAGGTGATGAATACGATGAGGAATTTGAAGGAGATGAAAATGATGAAGATGAGGATGACGATATCATTGATGGAATGGTTTTTGGTTTTTAA 879 0.4323 MQAHTFSFISSIETNETVDESSISLSLGPPGTHHKTNYSATTLHHHHHQKQNLTIDDEQSGVTVALHIGLPTTISQNNTPINKPDLHLASAPFQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGVKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGTKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVDSCEDQEVSLGDEYDEEFEGDENDEDEDDDIIDGMVFGF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2802 292 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
Mal8g2802 292 Gene3D Classic Zinc Finger 154 244 - -
Mal8g2802 292 PANTHER ZINC FINGER PROTEIN WIP6 4 283 - -
Mal8g2802 292 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Mal8g2802 292 SUPERFAMILY beta-beta-alpha zinc fingers 180 217 IPR036236 -
Mal8g2802 292 PANTHER ZINC FINGER PROTEIN WIP2 4 283 IPR043584 GO:0003700|GO:0010468
Mal8g2802 292 SUPERFAMILY beta-beta-alpha zinc fingers 94 133 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2802 Mal-Chr8 71630855 71632436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2802 19 264 C2H2 Transcription Factor Family AT1G13290 68.826 3.84e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal8g2802 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2802 - - aprc:113870355 447.973