Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2773 ATGCAAAGCTTCAAAACAGCTCAATCAAACTCTCAACTCTATTGCCACCAGCCCTTCTTGCTTCGGGGAGAAGACATAAACAGAAACACAATGCGTTTCTCTGATCTTGGAGACTTTCATCATTCTTCTCCTTTCTTTCCACAACAAGACGCTGTTGATTTAACTTCAAGTTGTATCTTTAGTAGTGTAAAGTCGAACAATGTTGTTATTGGTGGTAGTAACATGCAGTATGGGACAATCAACACGAATGTTGGGTCTGCAGAGATTGCTTCAAATGGTGGAGGGTGTTCGGATGCAGGGCTGCAGCTGCAGCAGCAACTGATGTACAACAAGGGAATAGCCTCCTTGCCTTTGGGGAATTGTCATGTTGAGAATTGGGCTGATTCTGGCATGGCTGATAATAATAGCCAACATACTGATGATACTTCCACTGATATTGATATCGATACCGATGATAAACATCAATCCAATAGGGGAAACGCCCACTCCAATAATCAGACCAAGATCAGAGCCGAAGATCACAAGACACTTCGTAGACTTGCTCAAAATCGCGAGGCGGCAAGGAAGAGCCGGTTACGGAAGAAGGCATATGTACAACAGCTGGAGAGCAGCCGAGTGAAGCTCATGCAATTAGAGCAAGAGCTTCAACGAGCACGTCAACAGGGGATATTTATTGCAAATCCTGGAGATCAAGGTCATTCGTCTGTTGGAAATGGTGCTCTAGCATTTGACATGGAGTACGCCCACTGGGTTGACGAGCATCAACGTATGCTCAATGATTTAAGATCGGCGTTAAATTCTCAAATGGGTGATAATGAATTGCATCTTCTTGTTGATGGTGTCATTGCACATCATAATGAATTATTTAGGTTAAAGAGCATAGGGGCAAAGGCTGATATATTTCACATGCTTTATGGGCTGTGGAAGACACCAGTAGAAAGATTTTTTATTTGGCATGGTGCATTCCGTTCATCCGAAATTCTCAAGATAGTCAGGGACCACCTCGAGCCGTTAACTGAAAGTCAGATGATGGGAATTTGTAATCTGCAGAAGTCTACGCAGCAAGCTGAAGATGCTTTATCTCACGGCATGGAAGCATTGAAACAATCTCTTTTAGAGATACTTTCCTCTACCCCATCGGTATCCAGTACCGGTTGTGGAAATGTAGCTGATTACATGAGCCAGATGGCATTTGCAATGAACAAGCTTGCATCCCTAGAGGATTTCCTTCATAAGGCTGACCTCTTGAAGCAAGAAACTCTGCAACAGTTGCAAAGAATTTTGACGACACGCCAGACTGCAAGGGCTCTCCTTGTCAGAAATGATTACATTTCAAGACTACGAGCACTTAGTTCGTTATGGTTAGCACGCCCGAGGGAGTAG 1383 0.4375 MQSFKTAQSNSQLYCHQPFLLRGEDINRNTMRFSDLGDFHHSSPFFPQQDAVDLTSSCIFSSVKSNNVVIGGSNMQYGTINTNVGSAEIASNGGGCSDAGLQLQQQLMYNKGIASLPLGNCHVENWADSGMADNNSQHTDDTSTDIDIDTDDKHQSNRGNAHSNNQTKIRAEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLMQLEQELQRARQQGIFIANPGDQGHSSVGNGALAFDMEYAHWVDEHQRMLNDLRSALNSQMGDNELHLLVDGVIAHHNELFRLKSIGAKADIFHMLYGLWKTPVERFFIWHGAFRSSEILKIVRDHLEPLTESQMMGICNLQKSTQQAEDALSHGMEALKQSLLEILSSTPSVSSTGCGNVADYMSQMAFAMNKLASLEDFLHKADLLKQETLQQLQRILTTRQTARALLVRNDYISRLRALSSLWLARPRE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2773 460 Gene3D - 174 223 - -
Mal8g2773 460 ProSiteProfiles DOG1 domain profile. 240 457 IPR025422 GO:0006351|GO:0043565
Mal8g2773 460 PANTHER TRANSCRIPTION FACTOR TGA9 39 460 - -
Mal8g2773 460 MobiDBLite consensus disorder prediction 132 173 - -
Mal8g2773 460 Coils Coil 194 221 - -
Mal8g2773 460 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 39 460 - -
Mal8g2773 460 SMART brlzneu 171 234 IPR004827 GO:0003700|GO:0006355
Mal8g2773 460 Pfam Seed dormancy control 258 332 IPR025422 GO:0006351|GO:0043565
Mal8g2773 460 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Mal8g2773 460 CDD bZIP_HBP1b-like 175 226 - -
Mal8g2773 460 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Mal8g2773 460 Pfam bZIP transcription factor 174 210 IPR004827 GO:0003700|GO:0006355
Mal8g2773 460 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
Mal8g2773 460 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2773 Mal-Chr8 70028910 70032870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2773 3 460 bZIP Transcription Factor Family AT1G68640 51.368 1.97e-145 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal8g2773 DOG1 5.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2773 K14431 - gmx:100797393 614.764