Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2764 ATGAGTGCTAGAGATGGTCTAAAGAGAGGAATGGATGTGATTGACACGGGAGCTCCTCTAAGTGTTCCAATCAGCGGAGCAACCCTAGGTCGAATTTTCAACGTACTTGGCGAGCCTATTGATAATTTAGGTCCTATAGATACTCGCACAACATCCCCTTTTCATAGATCAACGCCTGCCTTTATACAGTTAGATACAAAATTATCTATTTTTGAAATAGAAATTAAAGTCGTAGATCTTTTAGCTCCTTATCGCCGTGGCGGAAAAATAGGACTTTTCGGTGGAGCTGGGGTAGGTAAAACAATACTGATTATGGAATTGATCAATAACATTTCCAAAGCTCATGGAGGTGTATCCATATTTGGCGGAGTAGGTGAACATACTCATGAGGGAAATGATCTTTATATGGAAATTCAAATGAATGAACCGCCTGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTCAATGAACAGGACGTCCTTCTATTTATCGACAATATCTTCCGTTTTGTACAAGCCGGATCCGAAGTATCTGCCCTATTGGGCCGAATGCCTTCCGTTGTGGGTTATCAACCCACCCTGGGTACTGAAATGGGTACTTTACAAGAACGAATTACTTTTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCTGCAGACGATTTGACCGATCCTGCTCCTGTCACGACATTTGCACATTTGGATGCTACTATTGTACTATCAAGAGGATTATCTTCAAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAGCGTCAACCATAATCCAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACGTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATTCTTGGGTTAGACGAATTATGCGAAGATGATCGTTTAACCGTAGCAAGAGCACGAAAAATTGAACGATTCTTATCACAACCTTTTTTTCGTAGCAGAAGGTTTAAATTGATTCTTTCTGGAGAATTAGATAGTCTTCCTGAACAAGCCTTTTATTTGGTGGGTAATATCGATGAAGCTACTGCGAGGGCTACGAACTTTGAAATGGAGAAAAAATTCAAGAAATTACTTTAA 1155 0.3983 MSARDGLKRGMDVIDTGAPLSVPISGATLGRIFNVLGEPIDNLGPIDTRTTSPFHRSTPAFIQLDTKLSIFEIEIKVVDLLAPYRRGGKIGLFGGAGVGKTILIMELINNISKAHGGVSIFGGVGEHTHEGNDLYMEIQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSVVGYQPTLGTEMGTLQERITFTKEGSITSIQAVYVPADDLTDPAPVTTFAHLDATIVLSRGLSSKGIYPAVDPLDSASTIIQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELCEDDRLTVARARKIERFLSQPFFRSRRFKLILSGELDSLPEQAFYLVGNIDEATARATNFEMEKKFKKLL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2764 384 CDD F1-ATPase_beta 19 278 - -
Mal8g2764 384 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 75 273 IPR000194 GO:0005524
Mal8g2764 384 PANTHER ATP SYNTHASE 139 377 - -
Mal8g2764 384 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 276 373 - -
Mal8g2764 384 Gene3D - 9 273 IPR027417 -
Mal8g2764 384 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 138 - -
Mal8g2764 384 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 139 377 - -
Mal8g2764 384 TIGRFAM atpD: ATP synthase F1, beta subunit 1 373 IPR005722 GO:0015986|GO:0045261|GO:0046933
Mal8g2764 384 Gene3D - 341 382 IPR024034 -
Mal8g2764 384 Gene3D - 276 340 IPR024034 -
Mal8g2764 384 ProSitePatterns ATP synthase alpha and beta subunits signature. 264 273 IPR020003 GO:0005524
Mal8g2764 384 PANTHER ATP SYNTHASE 1 138 - -
Mal8g2764 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 278 IPR027417 -
Mal8g2764 384 SMART AAA_5 86 257 IPR003593 -
Mal8g2764 384 CDD ATP-synt_F1_beta_C 280 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2764 Mal-Chr8 69427728 69428997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2764 16 340 Primary Pumps ATPases(2) AT1G20260 26.415 9.12e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2764 K02112 - mnt:24286633 659.448