Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2748 ATGTGTAATCAATGCGGTTATCAAGTTACCAAATGCAATACAGCTTCTGATGCCTTGAACTTTTTGGAAAGAAAGGAATGTTTTGATGTAATGTTAATTGATACTCATATGCCAAACATGGATTCATATGACTTTGTTCAACATGCTACGGTACAACTCAACATTCCTGTTATTATGATGTCTTTTGATCTCACTGAAAGTTCTGTTACAAAGTCTATCACATATGGGGCTTGCGCATATTGGACAAAGCCTTTGTATGAGGAACAATTCAAGACCATGTGGCAGCATGTTGTAAGAAAAGGTTTGGAGGAAAATAAAAAATTTGAAATTATTGAAAGCATGGAGGTTCAAGGTCAGAGAAAACGGGAAAGAGAAGATGATGATGTCCCTAAAGAAACAAATGCAAAGAAGGCCCGTTTGTCATGGTCGCCGAAACTGCATCAACGATTTCTATGGGCTATCAATCAACTAGGCCTTGATAAGGCAAGACCTAAAAAGATTCTGAAATTGATGGATGTTCATGGTTTGAGTGTAGGACATGTTGCTAGTCATTTACAGAAATATAGAATTTCTTTGAAGAGATCGACCGATTCGAAAAAGTGTGGGAAGAAAATATCAAAGTTGAGTGGTGACTTTCAAGCTCAGTGGATTGATCAAGAAGAGAGTTGTCCGCGGGTAGATGATGATGCACAACAAAATAGGATGGAAATTGAGAAGGAGAAAATAACAGAAGAACAAGATTTGTCACCAGCAGCATCAAGTACTTTCCTTGCAATTATTGCGAAAGAAGATGAAAGCAAGTTTTGGTAG 810 0.3753 MCNQCGYQVTKCNTASDALNFLERKECFDVMLIDTHMPNMDSYDFVQHATVQLNIPVIMMSFDLTESSVTKSITYGACAYWTKPLYEEQFKTMWQHVVRKGLEENKKFEIIESMEVQGQRKREREDDDVPKETNAKKARLSWSPKLHQRFLWAINQLGLDKARPKKILKLMDVHGLSVGHVASHLQKYRISLKRSTDSKKCGKKISKLSGDFQAQWIDQEESCPRVDDDAQQNRMEIEKEKITEEQDLSPAASSTFLAIIAKEDESKFW* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2748 269 Gene3D - 1 116 - -
Mal8g2748 269 SUPERFAMILY Homeodomain-like 135 194 IPR009057 -
Mal8g2748 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 193 IPR017930 -
Mal8g2748 269 Pfam Myb-like DNA-binding domain 140 189 IPR001005 -
Mal8g2748 269 Gene3D - 133 195 - -
Mal8g2748 269 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 1 214 - -
Mal8g2748 269 Pfam Response regulator receiver domain 3 92 IPR001789 GO:0000160
Mal8g2748 269 ProSiteProfiles Response regulatory domain profile. 1 98 IPR001789 GO:0000160
Mal8g2748 269 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 137 190 IPR006447 GO:0003677
Mal8g2748 269 CDD REC_typeB_ARR-like 1 98 - -
Mal8g2748 269 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 214 IPR045279 GO:0009736
Mal8g2748 269 SUPERFAMILY CheY-like 3 117 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2748 Mal-Chr8 68889532 68891565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2748 18 194 Response Regulator Gene Family AT3G16857 38.565 1.52e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal8g2748 Response_reg 2.5e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2748 - K14491 mtr:MTR_4g021790 334.339