Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2744 ATGACCCTTTTCATTGACAACCCATCATTCCCTGCTGGTCTCAAAGTTATCGCTATTGATCATGACATCACTCTTCTTAACACCATTGAAGAGATGTGTAATCGATGCCATTATCAAGTTACCAAATGCAATACAGCTTCTGATGCCTTGAACTTTTTGGAAAGGAAGGAATGTTTTGATGTAATGTTAATTGATACTCATATGCCAAACATGGATTCCTATGACTTTGTTCAACATGCTACCGAACAACTCAACATTCCTGTTATTATGATGTCTTTTGATCTCAATGAAAGTTCTGTTACAAAGTCTATCACATATGGGGCTTGCGCATATTGGACCAAGCCTTTGTATGAGGAACAATTCAAGACCATGTGGCAGCATGTTGTAAGAAAAGGTTTGGAGGAAAATAAAAAATTTGAAATTATTGAAAGCATGGAGGTTCAAGGTCAGAGAAAACGGGAAAGAGAAGATGATGATGTCCCTAAAGAAACAAATGCAAAGAAGGCCCGTTTGTCATGGTCGCCGAAACTGCATCAACGATTTCTATGGGCTATCAATCAACTAGGCCTTGATAAGGCAAGACCTAAAAAGATTCTGAAATTGATGGATGTTCATGGTTTGAGTGTAGGACATGTTGCTAGTCATTTACAGAAATATAGAATTTCTTTGAAGAGATCGACCGATGCGAAAAAGCGTGGGAAGAAAATATCAAAGTTGAGTGGTGACTTTCAAGCTCAGTGGATTGACCAGGACCAAGGTGATTTTCAAGCTAAGTGGATTGACCAAGACGAGAGTTGTCCGCGGGTAGATGATGATGCACAACAAAACAGGATTGAAATTGGTGGATCCGACAATATTAGCAACATTTTTTCTGACTTGCCCAACTTGTTCCCAGATTTTGATTATTATGCATCACTATTGTGTCAGTCATGA 933 0.388 MTLFIDNPSFPAGLKVIAIDHDITLLNTIEEMCNRCHYQVTKCNTASDALNFLERKECFDVMLIDTHMPNMDSYDFVQHATEQLNIPVIMMSFDLNESSVTKSITYGACAYWTKPLYEEQFKTMWQHVVRKGLEENKKFEIIESMEVQGQRKREREDDDVPKETNAKKARLSWSPKLHQRFLWAINQLGLDKARPKKILKLMDVHGLSVGHVASHLQKYRISLKRSTDAKKRGKKISKLSGDFQAQWIDQDQGDFQAKWIDQDESCPRVDDDAQQNRIEIGGSDNISNIFSDLPNLFPDFDYYASLLCQS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2744 310 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 236 IPR045279 GO:0009736
Mal8g2744 310 Gene3D - 11 135 - -
Mal8g2744 310 Gene3D - 164 226 - -
Mal8g2744 310 SUPERFAMILY CheY-like 13 148 IPR011006 -
Mal8g2744 310 MobiDBLite consensus disorder prediction 147 168 - -
Mal8g2744 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 224 IPR017930 -
Mal8g2744 310 Pfam Response regulator receiver domain 16 123 IPR001789 GO:0000160
Mal8g2744 310 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 168 221 IPR006447 GO:0003677
Mal8g2744 310 SUPERFAMILY Homeodomain-like 166 225 IPR009057 -
Mal8g2744 310 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 11 236 - -
Mal8g2744 310 MobiDBLite consensus disorder prediction 147 166 - -
Mal8g2744 310 SMART REC_2 14 125 IPR001789 GO:0000160
Mal8g2744 310 Pfam Myb-like DNA-binding domain 171 220 IPR001005 -
Mal8g2744 310 ProSiteProfiles Response regulatory domain profile. 15 129 IPR001789 GO:0000160
Mal8g2744 310 CDD REC_typeB_ARR-like 16 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2744 Mal-Chr8 68791193 68792558 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2744 10 225 Response Regulator Gene Family AT2G25180 37.917 2.63e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal8g2744 Response_reg 4.7e-13 CL0304