Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2741 ATGGCTCCTTTTGTTGACAACCCATCATTCCCTGCTGGTCTCAAAGTTATTGCTATTGATCATGACACCACTCTCCTTAACACCATTGAGGGGATGTGTAATCAATGCGGTTATCAAGTTACCAAATGCAATACAGCTTCTGATGCCTTGAACTTTTTGGAAAGGAAGGAATGTTTTGATGTAATGTTAATTGATACTCATATGCCAAATATGGATTCCTATGACTTTGTTCAACATGCTACGGTACAACTCAACATTCCTGTTATTATGATGTCTTTTGATCTCACTGAAAGTTCTGTTACAAAGTCTATCACATTTGGGGCTTGCGCATATTGGACCAAGCCTTTGTATGAGGAACAATTCAAGACCATGTGGCAGCATGTTGTAAGAAAAGGTTTGGTGGAAAATAAAGAACTTGAAATTATTGGAAGCTTGAAGGTTCAAGGTCATAGAAAACGGGAAAGAGAAGATGACAATGTCCCAAAAGAAACAAATGTAAAGAAGGCCCGTTTGTCATGGTCTCCGAAACTGCATCAACGATTTCTATGGGCTATCAATCAACTAGGCCTCGATAAGGCAAGACCTAAAAAGATTCTGAAATTGATGGATGTTCATGGTTTGAGTGTAGGACATGTTGCTAGTCATTTACAGAAATATAGAATTTCTTTGAAGAGATCGACCGATGTGAAAAAACGTAGGAAGAAAATATCAAAGTTGAGTGGTGACTTTCAAGCTCAGTGGATTGACCAAGACCAAGGTGATGACTTTCAAGCTAAGTGGATTGACCAAGACGAGAGTTGTCCGCGGGTAGAAGATGATGCACAACAAAATAGGATGGAAATTGGTGAATCCGGCAATATTAGCGACATTTTTTCTAACTTGCCCAACTTGTTCCCAGATTTTGATTATTATGCATCACTATTGTGTCAGTCATGA 936 0.3889 MAPFVDNPSFPAGLKVIAIDHDTTLLNTIEGMCNQCGYQVTKCNTASDALNFLERKECFDVMLIDTHMPNMDSYDFVQHATVQLNIPVIMMSFDLTESSVTKSITFGACAYWTKPLYEEQFKTMWQHVVRKGLVENKELEIIGSLKVQGHRKREREDDNVPKETNVKKARLSWSPKLHQRFLWAINQLGLDKARPKKILKLMDVHGLSVGHVASHLQKYRISLKRSTDVKKRRKKISKLSGDFQAQWIDQDQGDDFQAKWIDQDESCPRVEDDAQQNRMEIGESGNISDIFSNLPNLFPDFDYYASLLCQS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2741 311 SUPERFAMILY CheY-like 13 152 IPR011006 -
Mal8g2741 311 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 10 239 - -
Mal8g2741 311 ProSiteProfiles Response regulatory domain profile. 15 129 IPR001789 GO:0000160
Mal8g2741 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 168 221 IPR006447 GO:0003677
Mal8g2741 311 Gene3D - 11 136 - -
Mal8g2741 311 Pfam Myb-like DNA-binding domain 171 220 IPR001005 -
Mal8g2741 311 SUPERFAMILY Homeodomain-like 166 225 IPR009057 -
Mal8g2741 311 Pfam Response regulator receiver domain 16 123 IPR001789 GO:0000160
Mal8g2741 311 SMART REC_2 14 125 IPR001789 GO:0000160
Mal8g2741 311 Gene3D - 164 226 - -
Mal8g2741 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 224 IPR017930 -
Mal8g2741 311 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 239 IPR045279 GO:0009736
Mal8g2741 311 CDD REC_typeB_ARR-like 16 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2741 Mal-Chr8 68745253 68746640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2741 10 220 Response Regulator Gene Family AT4G16110 38.039 1.98e-46 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal8g2741 Response_reg 1.1e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2741 - K14491 mtr:MTR_4g021790 399.438