Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2738 ATGGCTTCCAACTTTGTGTTCTGTTTCTTTTTCTTATTCTCTTATTTTCTGCTTCTTCTCTCAGCTGCACCTGAATCATGTGGATATCTTGGGGAAATCTCCTACCCTTTCACCACCGGTAATAACACAGAATGTGGCTTTCACATAACTGGTTGTGAACAGAACTATAGTTCGGTGAAAACAATCAACCTGGGCAACCAAACCTATATAATTGATAGCATCAATTATATGTACAATTCAATTATCATCTATGGCCCAAGTTCCTCTGATTCTTATTTAGAGTCAATTAAGAATACGCCACCACTCAGCATTAACACTATTACCTTCTATGGATGCTATCATATCCCTGAAAACATGTTTAAATATAGAAGCTGTTCTGATTATGATATCTACCTAACATCTAAACCACCCAGTTTCCCTATTTCTCCATGTCCATGTTTGCCAGTTCAGGTTGTTAATGAATTACCACACAACCCTTTTCACGGTTGTACAGAATTAATTTCATTAAAAGAAATTAAAGTTGATTTAGAGTCATTTGAAAGATGTTATCATACAGGAATGTCATGTCTAACAAACCAGGAAACTTTAAATTTCACATGTGGCCCAGCACTTACACCTCAGATTCCTACGAGAAATGAACGTCATGTGAAGAATGCAGTAAAAGGTTTATCTATTGGATTGGCAACCATGATTGCAATTGCATTGTTTGTTATGATTTTGTTTCTGTACTATTGGAGAATCAAATCTTCAGGTGTCAAAAACCAATTAAGAACCAATAATCATGGTCTCTCAAGAAATACAACAATCCCAGAAAGTGGAGCTGTCTACTTTGGGATTCCTGTCTTCTCCTATGAGGAGCTCAAAGAGGCAACAAACAATTTTGATCAAGCTAGAGAGCTTGGAGAAGGAGGGTTCGGGACTATTTATTACGGAAAGCTTGGAGATGGACGAGAAGTTGCAGTGAAGCGCCTTTTCGAGCGCAACTACAGACCAGTAGAATCATTCACAAATGAAATTCAGATCCTCACACGCATGCGCCACAGAAATCTAGTATCCCTTTATGGTTGCACATCACGTCACAGTCGTGAGTTGCTGTTAGTCTACGAATACGTCCCAAACGGCACAGTTAGTAGCCATCTCCATGACAACAAAGCCAATCAAAGCTCATCATTACCATGGGCAGTGAGAATGAAAATAGCCATAGAAACTGCCAGTGCATTAACTTATCTCCATGCTTCTGATGTCATTCACCGAGACGTGAAAACCACCAACATTCTCCTTGACAACAGTTTTTGTGTTAAAGTTGCCGATTTTGGTCTTTCGAGACTATACCCTAATGATGTCACACATGTCTCTACAGCACCGAGAGGAACACCGGGCTATGTTGATCCAGAATATCGCTTATGCTACCAGCTAACAAGCAAGAGCGATGTATATAGCTTCGGCGTTGTTCTTGTTGAGCTAATATCATCTTTGCCAGCAGTTGATGTGACAAGGGATAGAAATGACATTAAATTAGCAAATCTAGCCATAAGGAAGATTCAAAAAAGGGAAATTTGTGAGTTGATTGATCCTTCTCTTGGTTTTCAGACAGATGAGAAATTAAAAGTGGTGATAACTTCTGTTGCAGAATTGGCTTTTCAGTGTTTGCAAGAGGAGAAGGAATTGAGACCCTCTATGTCTGAAGTATTGGAGGTGCTGCAGAGGATTGAAAGTGGGAAGGATGATGTAGAGAATCATGAGGCGATTGATTTTCATCATGGTGTAGGAGTAGCACAGAGTTATGCACATCCATCACTTCCAAATACTTGGATGAAGCCACAGCGCCATCAACGAACACTTTGA 1845 0.3967 MASNFVFCFFFLFSYFLLLLSAAPESCGYLGEISYPFTTGNNTECGFHITGCEQNYSSVKTINLGNQTYIIDSINYMYNSIIIYGPSSSDSYLESIKNTPPLSINTITFYGCYHIPENMFKYRSCSDYDIYLTSKPPSFPISPCPCLPVQVVNELPHNPFHGCTELISLKEIKVDLESFERCYHTGMSCLTNQETLNFTCGPALTPQIPTRNERHVKNAVKGLSIGLATMIAIALFVMILFLYYWRIKSSGVKNQLRTNNHGLSRNTTIPESGAVYFGIPVFSYEELKEATNNFDQARELGEGGFGTIYYGKLGDGREVAVKRLFERNYRPVESFTNEIQILTRMRHRNLVSLYGCTSRHSRELLLVYEYVPNGTVSSHLHDNKANQSSSLPWAVRMKIAIETASALTYLHASDVIHRDVKTTNILLDNSFCVKVADFGLSRLYPNDVTHVSTAPRGTPGYVDPEYRLCYQLTSKSDVYSFGVVLVELISSLPAVDVTRDRNDIKLANLAIRKIQKREICELIDPSLGFQTDEKLKVVITSVAELAFQCLQEEKELRPSMSEVLEVLQRIESGKDDVENHEAIDFHHGVGVAQSYAHPSLPNTWMKPQRHQRTL* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2738 614 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 583 IPR044652 -
Mal8g2738 614 Pfam Protein tyrosine and serine/threonine kinase 297 567 IPR001245 GO:0004672|GO:0006468
Mal8g2738 614 Gene3D Phosphorylase Kinase; domain 1 271 370 - -
Mal8g2738 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Mal8g2738 614 CDD STKc_IRAK 300 570 - -
Mal8g2738 614 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Mal8g2738 614 SMART serkin_6 294 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2738 614 SUPERFAMILY Protein kinase-like (PK-like) 270 568 IPR011009 -
Mal8g2738 614 Gene3D Transferase(Phosphotransferase) domain 1 371 591 - -
Mal8g2738 614 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 17 583 - -
Mal8g2738 614 ProSiteProfiles Protein kinase domain profile. 294 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2738 Mal-Chr8 68609360 68612112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2738 37 572 Receptor kinase-like Gene Family AT1G25390 45.534 1.35e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal8g2738 PK_Tyr_Ser-Thr 8.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2738 - - var:108334729 611.298