Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2645 ATGGTTAAGACAGAGATTAACAAGATCAACAAAGAAAAATCAAAGCCAATGCAACAACAAACTTTATCATCAACAGCAGCATCATCAAATGAGAAGAAGAAAAAATACAAAGGAGTGAGAATGAGGAGTTGGGGTTCTTGGGTATCAGAAATTAGAGCTCCAAATCAAAAAACAAGAATATGGTTAGGTTCATATTCAACTGCAGAAGCAGCTGCTAGAGCCTATGATGCTGCACTTTTATGCCTTAAAGGTTCCTCTGCAACAAATCTTAACTTCCCTTTAGAATGTTCTTCACATTTCATTCCTCAAGAAAACATTGCTATGTCACCTAAATCCATCCAAAGAGTAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAGTAACAATGATATTGCTATTAGCACCCCACCAACTTCTCCTCCTAATCTTGCTTCAACAACTACCTCATCTTCAATAGTTTCATCTCCATCAATGTCATCTTCTCCTTCTGATCAAATTGATGATGATGTTTCACTGTTTTCATCTTTTGGGGCCTACACTACTAGCTGTGATGATCATTATCAACCAAATGAATCAATGGCTATGATGGATTCTTGGTATGGATTTGATGGTTTACAATCACCAAAACATGTTGTTGATCAAATGCTAAGTGGTGCGTTGTTTGATATTGATTCAACTCAAGTACTTCTTGATGATTGGTATGAAGAAGGTGACATTAGTTTGTGGAGCTTCTACTAA 738 0.3767 MVKTEINKINKEKSKPMQQQTLSSTAASSNEKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSATNLNFPLECSSHFIPQENIAMSPKSIQRVAAAAAAAAAASNNDIAISTPPTSPPNLASTTTSSSIVSSPSMSSSPSDQIDDDVSLFSSFGAYTTSCDDHYQPNESMAMMDSWYGFDGLQSPKHVVDQMLSGALFDIDSTQVLLDDWYEEGDISLWSFY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2645 245 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 244 - -
Mal8g2645 245 ProSiteProfiles AP2/ERF domain profile. 35 93 IPR001471 GO:0003700|GO:0006355
Mal8g2645 245 MobiDBLite consensus disorder prediction 131 165 - -
Mal8g2645 245 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Mal8g2645 245 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Mal8g2645 245 MobiDBLite consensus disorder prediction 1 37 - -
Mal8g2645 245 CDD AP2 34 93 IPR001471 GO:0003700|GO:0006355
Mal8g2645 245 SUPERFAMILY DNA-binding domain 35 94 IPR016177 GO:0003677
Mal8g2645 245 SMART rav1_2 35 99 IPR001471 GO:0003700|GO:0006355
Mal8g2645 245 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 12 244 - -
Mal8g2645 245 MobiDBLite consensus disorder prediction 13 29 - -
Mal8g2645 245 Gene3D AP2/ERF domain 34 95 IPR036955 GO:0003700|GO:0006355
Mal8g2645 245 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2645 Mal-Chr8 63265287 63266024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2645 36 244 AP2-EREBP Transcription Factor Family AT1G21910 49.099 3.40e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g2645 AP2 5.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2645 - - mtr:MTR_5g058470 347.436