Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2632 ATGGGTCCAGCAAGTCAGAAGCATAATTCATCTTATGTCTCGAAAAGCACAAGGAGGTTGAGAATCATCTATGATGATCCTGATGCAACAGATTCATCATCTGATGAATCAAATCATTATGTCCAGGAACCAGGGAAGAGGAAGAGAGTTGTGCTTGAACTTGCAATCCCTAATTCTGAGGAAACAGTGACTGGAAAGAATAAGAAGAGACGTGGAAAACCAACACCTACAGTCAGACAACAATCTTGCAAATATAGAGGTGTTCGAAGGAGGAAATGGGGTAAATTTGCTGCTGAGATCCGTAATCCGTTTACAGGTAAACGGAAATGGTTGGGTACTTTCGACACGGCTGAAGATGCTTCAAAGGCATATCAAGATCAAAGACTTGAATTTACAGCCAGGGCTACGCGTTTGTCTAATGAGAATAGGAACAAAAATTTCAAAAATCGTGTTACGATTAAGACTACAGTTGATGCTTTAAAGCCATCTTCGCCCGATCTGGTTAATTGTGTTCCTAAATTGATTGAGAGTGGTAAGATTTCAGGTAATGAAGCTATTGAGACTAATTCTTTTCAAGTGGTGCAAAAACAGGATGTAGTTGGGAGTCCGGATTTGTCTTGGTTGGATGTAGATTGTTTAACATTTGATGGTTCGGGGCAAGGCTTGGTTCATCTTGGTTTCCGTAATGACCTTCAGGTTTCTGATTTTGATAAGAATGGACCAATTGCGATCGATCTTCCATATCTTAATTTGGGTGACTTTGAGGCAGGAAATATGATTTTTAATGATGTTGGTGCTGAATCTGTTGATGAGGATGAGATTGCTAGTTGGATTGAAGAACCCTCGGACGCACCAGGTCCATAA 864 0.4051 MGPASQKHNSSYVSKSTRRLRIIYDDPDATDSSSDESNHYVQEPGKRKRVVLELAIPNSEETVTGKNKKRRGKPTPTVRQQSCKYRGVRRRKWGKFAAEIRNPFTGKRKWLGTFDTAEDASKAYQDQRLEFTARATRLSNENRNKNFKNRVTIKTTVDALKPSSPDLVNCVPKLIESGKISGNEAIETNSFQVVQKQDVVGSPDLSWLDVDCLTFDGSGQGLVHLGFRNDLQVSDFDKNGPIAIDLPYLNLGDFEAGNMIFNDVGAESVDEDEIASWIEEPSDAPGP* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2632 287 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR-LIKE PROTEIN 10 190 - -
Mal8g2632 287 MobiDBLite consensus disorder prediction 1 46 - -
Mal8g2632 287 ProSiteProfiles AP2/ERF domain profile. 84 148 IPR001471 GO:0003700|GO:0006355
Mal8g2632 287 SUPERFAMILY DNA-binding domain 84 136 IPR016177 GO:0003677
Mal8g2632 287 CDD AP2 83 149 IPR001471 GO:0003700|GO:0006355
Mal8g2632 287 Pfam AP2 domain 83 129 IPR001471 GO:0003700|GO:0006355
Mal8g2632 287 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 190 - -
Mal8g2632 287 MobiDBLite consensus disorder prediction 58 81 - -
Mal8g2632 287 MobiDBLite consensus disorder prediction 1 17 - -
Mal8g2632 287 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Mal8g2632 287 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Mal8g2632 287 Gene3D AP2/ERF domain 83 148 IPR036955 GO:0003700|GO:0006355
Mal8g2632 287 SMART rav1_2 84 154 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2632 Mal-Chr8 62528154 62529017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2632 18 133 AP2-EREBP Transcription Factor Family AT1G68550 48.031 6.70e-24 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g2632 AP2 3.4e-10 CL0081