Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2610 ATGGGGAGAAATTCTTCATTGCAACTCAATATTCTCAGCTTTAATATTGTCCTGCAATTGTTAGCATGTTCAATAGTGAAAAGAAGCCACTGCTTAGTGCCACAAAGTTCCATTATGAGCATAGGTGCTGTGCTTGATTTGGTTTCATTAATGGGAAAGCATCAGAAGATAGCAATGGAAATTGCAGTGAAAGAGTTCAACAACCAATTGAGTTCGTCCAAGCTGGATTTGCAAATAAAAGATTCACATGGAAATTCTGCTCAAGCTATTTCAAGTGTTATGGATCTCTCAAGGAGCGACCAGGTGTTGGCCATCATAGGAACGATTACACACAACGAAGCAACACTTGCTAGTGAATTCGGTGACAACATAAAGAACACTCCTATCTTGTCTCTAACTTCATTTGCTGGCAGACAAGAATTATTTTCTCCTAGATTGCCACATTTCATCGAACTAGGAGATGATATTAACCATCACATTCAATGCATTGCAGCAATTGTAGGAGAATTCAGATGGAAAAAGGTGGCAGTAATTTATGAACATAATAATGACGACTTTTCCTCTGATCCAGAAATAATACTTAGCCTCTCTAATTCTCTTAAACAAGTTGGTTCTGAAATTGAAAGCCATTTAGCTTTTCCTTCTTTATCCACACTTTCAGACCCAAAATCTACAATAGGAAATGAGCTTAATAAGTTGAAAAGGAAGAGTAATAGGGTCTTCTTGATTATTCATTCTTCTTTAGAGTTGGCTAACATGATTTGTAAGAAAGCAAATGAAATAGGTTTGATGGAAAAAGGTTCCGCGTGGATTATCCCGGACGAAGTTGCTGGCCTACTTGATTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAGAAAACACTTCATAGAAATAAATAAGGCTTTTAGAAAGTTTAAATTCATATTCCAAAGAAAGTTTGCACTAGAATACCCTGAAGAAGATAACATTAACCCAAGTAGCTTTGCACTTCAAGCATATGATGCAACTAAGGCTATTGCTGAAGCTGCAAATAAATTATCACAGGGAAAGTTCATATTTGAACAATTCTCAGAAAAGATTTTGTCTAGTAAATTTGAAAGAATGAGTGGAAAGATTTACTCAAAGAATGGACATTTTCTCCAAGCACCGACCTTCAACATAATTAATGTGATTGGGAAAAGTTATAGAGAAATAGCATTTTGGTCTTCAACACTTGGTTTTTCAAGGAACATAGTTAAACATCAAGTAATGGAGACGAAAAACGCAAATAATGGTTCTAATGAAGTTTTCGGCACAGTTTATTGGCCTGGAGATTTACAATCAGTTCCTAAAGGATGGATTCACGGTACTGAGGAAAGGTCGTTGAAAATAGGAGTGCCTGCCAATGGTGCCTTTACTCAGTTTGTGAATGTAACACATGACAGTAGGAATGGAACTTTCATCACTGGTTTCTCTATCGGTGTCTTTAAAGTAGTTGTCGAACGTTTACCTTATGATTTACAATACAAGTTTGTTCCTTTCAATGGCTCATACGATGAAATGGTTTATCAAGTCTACAATAAGACATTGGATGCTGCAGTTGGTGACACAGCCATAGTGGAATACAGATATCATTTAGTGGACTTTTCACAACCGTATGTTGAATCGGACCTCCACATGGTGGTTACTGAGAAACCAGCAAAATCAAAAGAAACATGGAGGTTTTTGGATGCCTTTACAAAAGAAATGTGGCTGATGATAGCAGCTATGCATATTTTTGTAGGAGAACCAATAAGAAGACCGTTAGCTCAGGTTGTACTGGCGCCGTGGTTATTTGCTATTTTCATTGTGACAAACAGTTTCACAGCAAGTTTGACATCCATAACTATTTCACAAGTAAAACCATCGGTGTTAGATATTCAGACCCTTAAAGAAAGAAATTCACCGGTTGGATGTAATGGAAATTCATTTATTGTGAAGTATTTGACGGAAGTACTAAAGTTTAGGCCTGAGAACATTAGGAAAATAAATTCCATGAGTGACTACCCTGCTGCCTTTGAGAAGAAGGAAATAGAAGCCGCCTTCTTTGTTGCGCCTCATGCTAAAGTATTTCTAGCAAAGTACTCATGTAAGGGCTTCATCAAAGTGGGGAACGTTTTCAGGCTTGGCGGCTTTGGTTTTGTATTTCCAAAAGGTTCAAGTCTAGTTGCTGACATATCAGAGGCATTGCTGAATATTATAGAGAACGGAGAAACAGAACAACTAGAAAAAGAGATGTTGATTGAGATAGAGAGTGAAAGCAAAGCCAATTGTTCTTCTTTAGAGAGCAACAAGGGGAAAAATAATTCATCGATAGGCCTTCCGCCTTTCCTTGGTCTGTTTTTGATCTGTTCTACTTTCGCTATTCTTGCTTTGTCATATCACATGATTTGTTTGTTAGTGAAGAATGTAGAAACTTTGAAAAGACACACAGTTTTAGCATTAACACAATTATGGAGAATATCGAGATGTACAACCAAGTTTTTTGCTTGGTGTTGTTCGAAACTTCGATCAAGGATCATGACAAGAGTAAGTAGTTGCACAGAAACAAGAAATGCATCAGAGGAGACTGTCACTAAGAGCTAG 2622 0.3722 MGRNSSLQLNILSFNIVLQLLACSIVKRSHCLVPQSSIMSIGAVLDLVSLMGKHQKIAMEIAVKEFNNQLSSSKLDLQIKDSHGNSAQAISSVMDLSRSDQVLAIIGTITHNEATLASEFGDNIKNTPILSLTSFAGRQELFSPRLPHFIELGDDINHHIQCIAAIVGEFRWKKVAVIYEHNNDDFSSDPEIILSLSNSLKQVGSEIESHLAFPSLSTLSDPKSTIGNELNKLKRKSNRVFLIIHSSLELANMICKKANEIGLMEKGSAWIIPDEVAGLLDSVNSSVIFNMQGVVGFRKHFIEINKAFRKFKFIFQRKFALEYPEEDNINPSSFALQAYDATKAIAEAANKLSQGKFIFEQFSEKILSSKFERMSGKIYSKNGHFLQAPTFNIINVIGKSYREIAFWSSTLGFSRNIVKHQVMETKNANNGSNEVFGTVYWPGDLQSVPKGWIHGTEERSLKIGVPANGAFTQFVNVTHDSRNGTFITGFSIGVFKVVVERLPYDLQYKFVPFNGSYDEMVYQVYNKTLDAAVGDTAIVEYRYHLVDFSQPYVESDLHMVVTEKPAKSKETWRFLDAFTKEMWLMIAAMHIFVGEPIRRPLAQVVLAPWLFAIFIVTNSFTASLTSITISQVKPSVLDIQTLKERNSPVGCNGNSFIVKYLTEVLKFRPENIRKINSMSDYPAAFEKKEIEAAFFVAPHAKVFLAKYSCKGFIKVGNVFRLGGFGFVFPKGSSLVADISEALLNIIENGETEQLEKEMLIEIESESKANCSSLESNKGKNNSSIGLPPFLGLFLICSTFAILALSYHMICLLVKNVETLKRHTVLALTQLWRISRCTTKFFAWCCSKLRSRIMTRVSSCTETRNASEETVTKS* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2610 873 Pfam Bacterial extracellular solute-binding proteins, family 3 487 756 IPR001638 -
Mal8g2610 873 PANTHER GLUTAMATE RECEPTOR 35 594 - -
Mal8g2610 873 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 592 836 - -
Mal8g2610 873 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 594 - -
Mal8g2610 873 Gene3D - 35 150 - -
Mal8g2610 873 SMART GluR_14 460 758 IPR001320 GO:0015276|GO:0016020
Mal8g2610 873 Gene3D - 455 583 - -
Mal8g2610 873 Pfam Receptor family ligand binding region 56 396 IPR001828 -
Mal8g2610 873 SUPERFAMILY Periplasmic binding protein-like I 40 452 IPR028082 -
Mal8g2610 873 PANTHER GLUTAMATE RECEPTOR 592 836 - -
Mal8g2610 873 CDD GluR_Plant 461 759 - -
Mal8g2610 873 Gene3D - 155 329 - -
Mal8g2610 873 Pfam Ligand-gated ion channel 757 796 IPR001320 GO:0015276|GO:0016020
Mal8g2610 873 CDD PBP1_GABAb_receptor_plant 40 417 IPR044440 -
Mal8g2610 873 SUPERFAMILY Periplasmic binding protein-like II 437 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2610 Mal-Chr8 61340890 61345267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2610 13 819 Ion Channels AT2G29120 30.103 1.82e-98 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2610 - - mtr:MTR_5g059920 1490.71