Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2595 ATGTTTTTGCCTCAGGCAGCCTGTGTAGACCCCAGAATATGGCAGATATGTGCCGGCCCCGACGCCAAGATTCCGAAGATTCACTCTAAAGTTTACTACTTCCCACGAGGTCACTTGGAACATGCATGTCCTTCCCCTAACGTTGTGACAATCACCATTCTTGATCGTTACCGTCCATCCATTCCATGCATCATCTCAGCCGTTGATCTCCTTGTTGATCCTTGCACCGATGAGGTTTTCGCCAAACTGCTCTTCACTCCCATAACTGACCAAGAACCTCCTCCTGTGGTTCCTGGCCAAGAACCAGCTCCTCTTGTTTCTTATGTCAAGACTCTCACACAAACTGATATTAATAATGTATTAGTTGTACCTCGTGAATTCGCTGACTTGATGATCTTTCCAAAGCTTGACTTGGAAGAGTCTCAGAACATCTTCTTCACCGACCTTCAAAGCCGAGAATGGGGGTGTAATTATAGCTACTTGAGACCCGGTAGACACCGTCTCTCTACTGGCTGGACTTACTTTGTGAGGGAGAAGAAGCTCGTGGCTAAGGATTCTGTTGTTTTCATTAAAAACTCTGTCGGAAAGATAATAGTCGGAATTCGTAGGAACACAAAGTTTACTGCAGATGAAGCGGGTGAAGGAGGCGGTAATTTAACTGAGAGTGCAGTTTTGGATGCAGTGAAATTGGCAGGCAAGAACACGGCGTTTGAAGTTGTGTATTATCCGACAGCTAGGAATTGGTGCAATTTTGTGGTTGATGCTAATCTTGTGGATGAAGCTATGAAAATTAGTTGGGCATCTGGAATGAGAGTTAACTTGGATGGAACTAAAATCTCGCAGAATCCTTGGCAGGTTGAAGTTTGCGACATACCTGCACAAGATCTATCATTCCCCTCAACAAAAACTCATAGACATGCTCAAAGTTCTTCCCCCCAACAAATTTCATATTCTTCTCCGCCAATTACTCTGCCTCAATTACCGCCCCCACCGTTAACTTCCTCTTTCATCCCTATGCCAGAGTTATCTTTTTCAACAGTGGGATCTGTGAAACGAGCAATGTTGAATCGTGATACGTTTCCAGCTGGCACGAAGGTCGCTAGGCTTGACCATTTATCTGTATCAGATTCTTCAAATGTTTTGAACGATAAGGGTGATGGTTTTGTTGGGAACAGTTCAATGGCAGGGTTGAGTGATACTTTGTCTGATACAGCGCTAAACAATGACAGTCCTAAATCTGCCGACTTCTTGCCTCATAACCATAATAGTTTGAACTCCTTTGGGAGCAATGAACCATGCACCAAGTGA 1308 0.4434 MFLPQAACVDPRIWQICAGPDAKIPKIHSKVYYFPRGHLEHACPSPNVVTITILDRYRPSIPCIISAVDLLVDPCTDEVFAKLLFTPITDQEPPPVVPGQEPAPLVSYVKTLTQTDINNVLVVPREFADLMIFPKLDLEESQNIFFTDLQSREWGCNYSYLRPGRHRLSTGWTYFVREKKLVAKDSVVFIKNSVGKIIVGIRRNTKFTADEAGEGGGNLTESAVLDAVKLAGKNTAFEVVYYPTARNWCNFVVDANLVDEAMKISWASGMRVNLDGTKISQNPWQVEVCDIPAQDLSFPSTKTHRHAQSSSPQQISYSSPPITLPQLPPPPLTSSFIPMPELSFSTVGSVKRAMLNRDTFPAGTKVARLDHLSVSDSSNVLNDKGDGFVGNSSMAGLSDTLSDTALNNDSPKSADFLPHNHNSLNSFGSNEPCTK* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2595 435 MobiDBLite consensus disorder prediction 302 321 - -
Mal8g2595 435 SUPERFAMILY DNA-binding pseudobarrel domain 106 204 IPR015300 -
Mal8g2595 435 SMART B3_2 108 205 IPR003340 GO:0003677
Mal8g2595 435 CDD B3_DNA 107 203 IPR003340 GO:0003677
Mal8g2595 435 Gene3D - 106 205 IPR015300 -
Mal8g2595 435 ProSiteProfiles B3 DNA-binding domain profile. 106 205 IPR003340 GO:0003677
Mal8g2595 435 PANTHER AUXIN RESPONSE FACTOR 17 7 291 - -
Mal8g2595 435 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 291 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal8g2595 435 MobiDBLite consensus disorder prediction 402 435 - -
Mal8g2595 435 Pfam Auxin response factor 227 275 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal8g2595 435 Pfam B3 DNA binding domain 110 204 IPR003340 GO:0003677
Mal8g2595 435 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2595 Mal-Chr8 60949846 60956784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2595 9 431 B3 DNA Binding Superfamily AT1G77850 30.039 8.25e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal8g2595 B3 6.4e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2595 - - mtr:MTR_5g060630 395.971