Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2592 ATGTTAATATTGGTTGTTGCAGATTCTACCAAGTTAAGGGTTTATACCGAAGCAAATTCATTTAATCTCACTATTATGGAATCATCTCGATCAATAAACTCAGGGATATCTTTGTTTGAAATTGAATATGGACGCTGGGTTGAAGACGAAGACAGACAAAATGAAGAGCTAAAAAATGCATTGCAAACTAATGCATCTGATATACAGCTTCATCTACTTGTTGAGACTAGCTTGAATCATTACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGAGTGATGTTTTCTATTTAATCGCTGGCGCATGGAAACCATCGGTAGAACGCCTTTTTCTTTGGTTTGGAGGATCTCGTCCATCACAGCTTCTAAATATCAGTGTACCCAAGCTTGACGCTTTAACTGATCAACAAATTGTTAGCATTAACAAACTCCGTTTATCCTCTCTTCAAGCTGAAGATGCTCTAACAGAAGGGTTAGAAAAACTACAACAGAGTATGATCAACAACATTCAAGCTGATCCCTTAGATTTTGGAAACTATTGCTTTCATATGGCTGCTGTCATGGACAAAGGAGAAGCAGTAGAAGGTTTTGTAAACCAGGCAGATCACTTTAGGCAACAAACTTTGGTGCACATGTCTCGACGTATCTTGACAATTGGGCAAGCTGCTCAAGGCTTACTTGCTATGGGAGAATACTTTCACCGTCTTCGCACTCTTAGCTCTTTGTGGACTGCTCGTTCATCAGGAACATCTTTATTTGAAATTGAATATGGACGTTGGATTGAAGAACAAGATAGACAAAATGAAGAACTAAGAAATGCTTTACACAATAATGCATCTGATCTACAGATCCATCTACTTGTTGAGACTAGCTTGAACCAGTACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGACTGATGCCTTCTATTTAATCTATGGCGCATGGAAAACATCGGTAGAGTGCCTTTTTAATTGGATTGGAGGATCCCTTCCATCACAGCTTCTAAATATCATTGTTCCCAAGCTTGATGCGTTAACTGATCAACAAATTGTTAGCACTAACAACCTCCGTTTATCCTCTCTGCAAGCTGAAGAAGCTCTATCAATAGGGTTAGAAAAATTCAAGCAGAGTGTGATCAACAACATTCAAGCTGATCCCTTGGATTTTGGAAACTATGGCTTTCAGATGGCTGCTACCATGGACAAAGGAGTAGTAGTACAATGTTTTGTAAACCAGGCAGATCACCTTAGGCAAGAAACTCTGATGTACATGTCTAGCATCCTAACAATTAGACAATCAGCTCAAGGCTTGTTGGCTATGGGGGGATACTTTCACTTACTTCGTAATTTTAGGACTCGTTTGATGGCCAGGATATAA 1389 0.3902 MLILVVADSTKLRVYTEANSFNLTIMESSRSINSGISLFEIEYGRWVEDEDRQNEELKNALQTNASDIQLHLLVETSLNHYSNLFRMKAEAAKSDVFYLIAGAWKPSVERLFLWFGGSRPSQLLNISVPKLDALTDQQIVSINKLRLSSLQAEDALTEGLEKLQQSMINNIQADPLDFGNYCFHMAAVMDKGEAVEGFVNQADHFRQQTLVHMSRRILTIGQAAQGLLAMGEYFHRLRTLSSLWTARSSGTSLFEIEYGRWIEEQDRQNEELRNALHNNASDLQIHLLVETSLNQYSNLFRMKAEAAKTDAFYLIYGAWKTSVECLFNWIGGSLPSQLLNIIVPKLDALTDQQIVSTNNLRLSSLQAEEALSIGLEKFKQSVINNIQADPLDFGNYGFQMAATMDKGVVVQCFVNQADHLRQETLMYMSSILTIRQSAQGLLAMGGYFHLLRNFRTRLMARI* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2592 462 Coils Coil 262 282 - -
Mal8g2592 462 ProSiteProfiles DOG1 domain profile. 36 247 IPR025422 GO:0006351|GO:0043565
Mal8g2592 462 ProSiteProfiles DOG1 domain profile. 251 461 IPR025422 GO:0006351|GO:0043565
Mal8g2592 462 PANTHER FACTOR TGA7, PUTATIVE-RELATED 29 249 - -
Mal8g2592 462 PANTHER TRANSCRIPTION FACTOR TGA9 253 455 - -
Mal8g2592 462 PANTHER FACTOR TGA7, PUTATIVE-RELATED 253 455 - -
Mal8g2592 462 PANTHER TRANSCRIPTION FACTOR TGA9 29 249 - -
Mal8g2592 462 Pfam Seed dormancy control 270 343 IPR025422 GO:0006351|GO:0043565
Mal8g2592 462 Pfam Seed dormancy control 55 126 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2592 Mal-Chr8 60801831 60806835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2592 248 461 Calmodulin-binding Proteins AT1G77920 50.698 1.74e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2592 K14431 - gmx:100775882 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2592 8 60801831 60806835 Mal2g2567 2 32737201 32739224 PCT