Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2587 ATGTGTAAGGAAAAGGTTCATATTAACATTGTGGTGATTGGTCATCCCCACTCTGGGAAGTCAACCATCGTTAATCATTTGATCGACAAGCTTGGAGGTATTGACAAGAGTGTCATTGAGAGATTTGATATAGAACCTCCTGAGATAAGCAACAAGCATGCTTGGGTGCTTGATAAGCTCAAGGCTCAGCGTGAAAGAGCTGACTGTGTTGTTCTCGTCATTGATTCCACTTCTAGTGGATTTGAAACTGGTCTTTCTATGGGTGATCAGACCCTTCAACACATTCTTCTTGCCTCAGTTTTAGGTGTGAAGCAAATGATCTGCTGCTGCAACAAGATGGATGCCACTACACCCAAATACTCCAGGGATAGGTTTAAAGAAACTGGGAAGACTTCTTCACCCTTTTTGATGAGGTTTGGCTATAACCCAGGCAACATTCCATTTGTTCCAGTCTCTGGTTTTGAGGGAGATAACTTGATTGAGCCCTCTACTAATATTGACTGGTACATCGGTCCCACCCTTCTTGAAACTCTTGACCTAATCAAAAAGCCTACTAGGCTGATTAAGGATCCTGGTGCAGTAGCTCATGCCGTCAGAGATAGGTTTTTGTCACTATGCAGGCAGTTGCAACGTGAACATAGAATGCTGATGGAAGAACTCGAACATCTATCTTCTGAGGGGCCAAACATCATGCTGAACTTGTCAGTCAAGTTCCTAGATTTTGTCATGGAAGAATGCAAATGCGTATCTACTAAGTGGGAAAATTTCAGGCAGGACTTGTTAGCCAAGTTTTAA 795 0.4277 MCKEKVHINIVVIGHPHSGKSTIVNHLIDKLGGIDKSVIERFDIEPPEISNKHAWVLDKLKAQRERADCVVLVIDSTSSGFETGLSMGDQTLQHILLASVLGVKQMICCCNKMDATTPKYSRDRFKETGKTSSPFLMRFGYNPGNIPFVPVSGFEGDNLIEPSTNIDWYIGPTLLETLDLIKKPTRLIKDPGAVAHAVRDRFLSLCRQLQREHRMLMEELEHLSSEGPNIMLNLSVKFLDFVMEECKCVSTKWENFRQDLLAKF* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2587 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 187 IPR027417 -
Mal8g2587 264 Gene3D - 1 66 IPR027417 -
Mal8g2587 264 Coils Coil 206 226 - -
Mal8g2587 264 Pfam Elongation factor Tu GTP binding domain 66 179 IPR000795 GO:0003924|GO:0005525
Mal8g2587 264 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 67 194 - -
Mal8g2587 264 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 66 - -
Mal8g2587 264 PANTHER TRANSLATION FACTOR 67 194 - -
Mal8g2587 264 Gene3D - 67 184 IPR027417 -
Mal8g2587 264 PANTHER TRANSLATION FACTOR 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2587 Mal-Chr8 60651749 60654095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2587 1 191 Eukaryotic Initiation Factors Gene Family AT1G07930 56.223 2.20e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2587 K03231 - mus:103986917 244.588