Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2578 ATGCTCACTGTTGGCTGGAGTTCTTTTTTGAAGAAGAAGAAACTCGTTACTGGCGATTCTCTTGTTTCCATTAAAAACTCAGCAGAAAAGTTAATTCTTAGAATCCGTTGGAACATGAAGTTCGCTGCAGCTGAAGCAGCGGCAGAGCAAAAGAAGAAGGAGGGTAAAGATGGTCAGTTGGAGGTGGAGGGAGATGGTTTTTCGTGGAGCGGTAAAAAGGGGAAGTTTACCGAGAAGGCAGTTATAGATGTGGTGGAATTGGCAAAGAAAAACACGATGTTTGAAGTTGTGTATTATCCGACTCCGAGGCCTAATTGGTGTGATTTTGTAGTGGATGCAAATGTTGTGGATGACTCTATGAAGATGCGTTGGGCATCTGGAATGATGGTGAAGCTTCTTTTGAAGAAAGATGAATCTTTATATTCAAAGACGACATTGTTTCATCCTCGGGGGAAAATCTTAAATGTGTCTAGTGTCCCTAATTGGCGCATGCTTGAGGTATTGATTCTTATTTAG 516 0.4167 MLTVGWSSFLKKKKLVTGDSLVSIKNSAEKLILRIRWNMKFAAAEAAAEQKKKEGKDGQLEVEGDGFSWSGKKGKFTEKAVIDVVELAKKNTMFEVVYYPTPRPNWCDFVVDANVVDDSMKMRWASGMMVKLLLKKDESLYSKTTLFHPRGKILNVSSVPNWRMLEVLILI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2578 171 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 167 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal8g2578 171 Pfam Auxin response factor 85 158 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal8g2578 171 PANTHER AUXIN RESPONSE FACTOR 17 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2578 Mal-Chr8 60378725 60379240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2578 1 148 B3 DNA Binding Superfamily AT1G77850 35.669 5.10e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2578 - - cam:101503141 133.265