Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2576 ATGTCTCCGCCTCAGCTACCCCGAGTCAAACCCAAAATCTGGCAGCAATGTGCCGGTACCGACGTCAAGACTCCCAAGATTCATTCAAAAGTTTACTACTTCCCACAAGGTCACTTGGAACATGCCTGCTCTTTCCCTAACCCTGAGGCAATCTCATTTCTTGATGCCGTTGATCTCCTTGCTGATCCTCACACCGACGAGGTCTTTGCCAAACTGCTCCTCACTCCCGTAACTGTCCACGACAATGTCCAAGAACCTCCTCTTGAGGTTCTTGACCAAGAAGATGATGGTGATGAGAAACTCCTTGTCACTGACATTCAAGGTAATGTTTGGGAGTACACTCATAGTCATAGCTATCGCGGAAATCCCAAGAGACATGTGTTATATACTGGCTGGAGTTCTTTTGCGAACAAGAAAAAACTCGTTGTTGGCGATTCTCTTGTTTTCATGAAAAACTCAGCAGGAAACGTAATTGTTGGAATCCGCCGGAACATAAAGTTCGCTGCAGCAGCAGCAGAGCAAAAGAGGAAGGAGGGTAAAAAGGGGAAATTAACCGAGAAGGCGGTTATAGATGCGGTGGAATTGGCGGAGAAAAACATGATGTTTGAAGAATGA 615 0.4618 MSPPQLPRVKPKIWQQCAGTDVKTPKIHSKVYYFPQGHLEHACSFPNPEAISFLDAVDLLADPHTDEVFAKLLLTPVTVHDNVQEPPLEVLDQEDDGDEKLLVTDIQGNVWEYTHSHSYRGNPKRHVLYTGWSSFANKKKLVVGDSLVFMKNSAGNVIVGIRRNIKFAAAAAEQKRKEGKKGKLTEKAVIDAVELAEKNMMFEE* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2576 204 SUPERFAMILY DNA-binding pseudobarrel domain 94 163 IPR015300 -
Mal8g2576 204 Gene3D - 59 165 IPR015300 -
Mal8g2576 204 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 94 203 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal8g2576 204 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 82 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal8g2576 204 Pfam B3 DNA binding domain 97 164 IPR003340 GO:0003677
Mal8g2576 204 PANTHER AUXIN RESPONSE FACTOR 17 94 203 - -
Mal8g2576 204 PANTHER AUXIN RESPONSE FACTOR 17 6 82 - -
Mal8g2576 204 SMART B3_2 69 165 IPR003340 GO:0003677
Mal8g2576 204 CDD B3_DNA 98 163 IPR003340 GO:0003677
Mal8g2576 204 ProSiteProfiles B3 DNA-binding domain profile. 69 165 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2576 Mal-Chr8 60355518 60356381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2576 1 203 B3 DNA Binding Superfamily AT1G77850 34.028 4.49e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal8g2576 B3 5.2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2576 - - mtr:MTR_5g060780 189.889