Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2539 ATGAAAGATCAAAGGGTTCTTCATATTGAAGATACTAGTCAAATTGAAAGGTCTAAATGGGTTTTGGATTCTCCTAATCCACCACCATTATGGAAAAAGCTATTGAGTTCATTGAAAGAGACCCTTTTGCCTCATGGAAACAAGTTATGTTTCTCGTCCAAGAAGAAAAGTTTTCATGCACATGCTTACTTATTTTTGCAGAATTTATTTCCAATCCTTGTTTGGTTGAAAGATTACACTGCTTCAAAATTTAAAGATGATCTTTTAGCTGGTTTAACTCTTGCGAGCCTTTGCATACCTCAGAGTATAGGCTATGCAAGTTTGGCAAAAGTTGATCCTCAATATGGCTTGTATACAAGTATTGTTCCTCCTCTTATTTATGCTGTGATGGGAAGCTCAAGAGATATTGCAATTGGACCTGTAGCTGTAGTGTCTATGCTGTTGTCTTCTTTGGTCACAAAAGTCATAGATCCTGTTGCTAATCCTCATGCCTATAGAGATTTTATCTTCACAGTCACCTTCTTTACTGGAATATTTCAAGCTGCATTTGGTATTTTCAGGTTGGGTTTTCTTGTGGATTTCCTTTCACATGCTGCACTAGTTGGATTCATGGCAGGAGCAGCAATCATTATTGGTCTTCAGCAGCTCAAGGGTCTTTTGGGGATCACTCACTTCACCACCAAAACAGATGCAGTATCAGTTTTGGTTTCTGTTTGTAAGTCTTTGCATCAACAAATTACTTCTGAAGAAAAATGGAGCCCTCTGAATTTTGTCCTGGGGTGTTCTTTCTTGATTTTCCTTCTAGTTACCCGCTTTATAGCAAGAAGAAAGAAAAAACTTTTCTGGTTGCCTGCAATTGCTCCTCTTCTATCAGTTATACTATCAACTTTAATTGTGTATTTATCAAAAGCTGATAAACAAGGAATTAATATAATAAAGCATGTGAAAGGTGGTCTGAATCAGAGTTCAGTTCACCAGTTACAATTCCATGGTCAAAATGTCGGTCAAGCGGCCAAAATCGGATTAGTTTGTGCAGTTATAGCCCTCACTGAAGCAATGGCTGTCGGTCGATCATTCGCTTCCATTAAGGGATACCAACTTGATGGGAATAGAGAAATGTTATCAATGGGAATCATGAACATTGCAGGATCATTAACTTCATGTTATGTAGCAACTGGTTCTTTTTCAAGGACTGCAGTTAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCAATTACTGTGATTTTGTTCCTGCAATTATTCGCACGGCTCTTATATTACACACCTATGGCTATTCTTGCTGCTATCATCCTCTCTGCACTTCCTGGACTGATTGATATAAATGAGGCTCGCTATATCTGGAAGGTTGACAAGCTAGACTTCCTTGCCTGTATTGGTGCTTTCGTTGGCGTCTTGTTTGCATCTGTAGAGATTGGTCTTCTAGTTGCAATATCAATCTCATTTGCAAAGATACTAATACAATCGGTTCGACCTGGAGTAGAAATTCTAGGAAGAGTTCCAAGAACCGAAGCCTTCTGCGATGTTACTCAATATCCGATGGCGATAAGCACACCAGGCATCGTAGTGATTCGCATAAGTTCCGGCTCACTCTGTTTTGCGAATGCCAATTTTGTCAAAGAAAGAATACTGAAGTGGGTCGTGGAAGAAAATGACATTCAAGAAACTGCTAAAGGAAATGTCCGAGCCATAATTATGGACATGACAAACCTCATGAATGTTGATACTTCTGGAATTCTAGCACTTGAGGAATTGCATAAGAGGCTGCTATCACGCGGCGTAGAATTGTATCATACCAATTTCTAA 1839 0.3904 MKDQRVLHIEDTSQIERSKWVLDSPNPPPLWKKLLSSLKETLLPHGNKLCFSSKKKSFHAHAYLFLQNLFPILVWLKDYTASKFKDDLLAGLTLASLCIPQSIGYASLAKVDPQYGLYTSIVPPLIYAVMGSSRDIAIGPVAVVSMLLSSLVTKVIDPVANPHAYRDFIFTVTFFTGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTTKTDAVSVLVSVCKSLHQQITSEEKWSPLNFVLGCSFLIFLLVTRFIARRKKKLFWLPAIAPLLSVILSTLIVYLSKADKQGINIIKHVKGGLNQSSVHQLQFHGQNVGQAAKIGLVCAVIALTEAMAVGRSFASIKGYQLDGNREMLSMGIMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVILFLQLFARLLYYTPMAILAAIILSALPGLIDINEARYIWKVDKLDFLACIGAFVGVLFASVEIGLLVAISISFAKILIQSVRPGVEILGRVPRTEAFCDVTQYPMAISTPGIVVIRISSGSLCFANANFVKERILKWVVEENDIQETAKGNVRAIIMDMTNLMNVDTSGILALEELHKRLLSRGVELYHTNF* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2539 612 SUPERFAMILY SpoIIaa-like 528 611 IPR036513 -
Mal8g2539 612 PANTHER SLC26A/SULP TRANSPORTER-RELATED 8 608 - -
Mal8g2539 612 PANTHER SULFATE TRANSPORTER 8 608 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mal8g2539 612 TIGRFAM sulP: sulfate permease 71 611 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mal8g2539 612 Gene3D STAS domain 502 612 IPR036513 -
Mal8g2539 612 Pfam Sulfate permease family 84 470 IPR011547 GO:0016021
Mal8g2539 612 CDD STAS_SulP_like_sulfate_transporter 523 608 - -
Mal8g2539 612 ProSiteProfiles STAS domain profile. 539 612 IPR002645 -
Mal8g2539 612 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Mal8g2539 612 Pfam STAS domain 523 608 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2539 Mal-Chr8 58307789 58315583 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2539 13 611 Inorganic Solute Cotransporters AT5G10180 62.292 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2539 K17469 - gmx:100776591 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2539 8 58307789 58315583 Mal8g2539 8 58307789 58315583 ECH
Mal8g2539 8 58307789 58315583 Mal2g2560 2 32614400 32619871 PCT