Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2519 ATGGAGGAAAAAATCATTGAACACAAAAGTGTTACCACAAAGGTTGTGAAGTCTAGTTTCATGTCTTCTTTGCCAAAAAGTGTTACAATATCAGTTACTGATAACTATGCCACAGACTCATCAAGTGATGAAGAACAAGGAAAAAATGGTTTTGTTCAAATAACAAGGAAAATAGTGAATGAGGTAAGATTTCAAGAATGTTCCACTCTTTCTAACAAGAACAACAAAAAGAGACATGAAGAGAAAAAGAACAATGGTGTTGGTGAATGTTGTTTGGAACAGAAAATTGAGAAGCCTAAACAAATAAATGATGTTGTTTATCAAAAGTTTCGCGGCGTTAGACGAAGGCCTTGGGGGAGATTTGCTGCTGAGATTCGCGATCCGCGGCTTCAAAGGAGAAAGTGGTTAGGGACTTATGATACTGCTGAAGAAGCTGCTTTGGTTTATGATAGAGCTGCAATTGATTGTAGAGGTGCTAATGCTGTTACAAATATCATCAAACCGCCACAGAAACAACAGCAGAAGAAAAAATCAGTGAAAGATGAATTTGTTTGTGACAAAAATTTATATGTTAATGTTGGTGTTGAATATGCTGATGATGTTTCTGTTGAGTGTGATAACAAAGAGAATTGTAATGGTAGTTCATCTTATTCTCAAGAATCTGTTGGTGAAATTTGGAGTGAAAGGATGAATGATCAAGAATGGATTAGAGAGGTAACTGGAGAGGAATATTTGGATGATGGTTTTATGTTTGTTGATGATTCATTTGGTTCTTTTTGTTCTTATTATGAACCTGTTCTTCCTACAATGGTTTCTAATGAGAGTGATTGCATTGTTGATAATATTCATCTTGAGGAGGATTTTGAATCATGTAATTGGGAGGTTGATAATTACTTCAATGACTCTCTGTCAGTGGATTGGGATTGA 927 0.3538 MEEKIIEHKSVTTKVVKSSFMSSLPKSVTISVTDNYATDSSSDEEQGKNGFVQITRKIVNEVRFQECSTLSNKNNKKRHEEKKNNGVGECCLEQKIEKPKQINDVVYQKFRGVRRRPWGRFAAEIRDPRLQRRKWLGTYDTAEEAALVYDRAAIDCRGANAVTNIIKPPQKQQQKKKSVKDEFVCDKNLYVNVGVEYADDVSVECDNKENCNGSSSYSQESVGEIWSERMNDQEWIREVTGEEYLDDGFMFVDDSFGSFCSYYEPVLPTMVSNESDCIVDNIHLEEDFESCNWEVDNYFNDSLSVDWD* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2519 308 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Mal8g2519 308 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Mal8g2519 308 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Mal8g2519 308 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 302 - -
Mal8g2519 308 Pfam AP2 domain 109 154 IPR001471 GO:0003700|GO:0006355
Mal8g2519 308 Gene3D AP2/ERF domain 108 166 IPR036955 GO:0003700|GO:0006355
Mal8g2519 308 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED 4 302 - -
Mal8g2519 308 SMART rav1_2 109 172 IPR001471 GO:0003700|GO:0006355
Mal8g2519 308 CDD AP2 108 164 IPR001471 GO:0003700|GO:0006355
Mal8g2519 308 SUPERFAMILY DNA-binding domain 109 165 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2519 Mal-Chr8 57238670 57239596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2519 4 301 AP2-EREBP Transcription Factor Family AT4G27950 32.622 1.95e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g2519 AP2 1.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2519 - - mtr:MTR_8g010340 439.499