Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2502 ATGGATTTCTTCAATAATTCACAAGATCCATTCAATGGTGAGTTAATGGAAGTTCTTGAACCTTTTATGAAGAGTTCTTCCACTACTCCCTCATCACCCCCTTCTTTAAATTCATACCTCCCTTCAACTTCATCTTCATCACCTTTTTACCCTTCTACCCCTTCTTTCTTCCAACCTTCTTCTTTTTCTCCTCAACCTTCATCTTCTTTTCCTTCACAGCCCAATTTCTACACAGAAAATGGTTATGGTTCATCAATGATGAGTTACCAATTTCCTCCTTCCTTAGGTGATTCATCATCAAATAGCCAAAATAATTTTATTGGCTTTGAACAACAACCACAACCAAATTCTTTTATTGGGCTAAACAACTTAACCCCATCTCAAATTAACCAGATCCAAGCCCAGATCCAGTTTCAGGCCCAACAACAACAAAACAACAGCACAAGCTTGAACTTTCTTGGGCCTAAGCCCATCCCAATGAAACAGCCAGGTGTACCTCCAAAGCCCACAAAGCTTTATAGAGGTGTTAGGCAAAGACATTGGGGGAAATGGGTAGCTGAGATAAGACTACCTAAGAATAGGACAAGGCTTTGGCTTGGTACTTTTGATACTGCTGAAGAAGCTGCTTTAGCTTATGATAGAGCAGCTTATAGATTAAGAGGTGATTTTGCTAGACTTAATTTCCCAAACATGAAAGACCAACAAGGTATGTTTGGTGAGTTTAAGGTTTTGCATTCATCTATTGATGCTAAACTTGATGCTATTTGTGAGAGTTTAGGTAATAGTAGTGATGTCAAGAAACAAGGGAAGGTTGAGAAAGGTTCTAAGAAGAAGGTTTTGAAGAAAGAGGTTCAATCTCCTCAACCATTGATTGTTGTTGAGAATAATGATGATGATAACAACAACAACAACAACAAGGTTGTTATTGAAGGTTCTTCTTTGTCTTCACCTAGTGAAGGTTCTGATGATTCTTCACCACTTTCAGATCTTACTTTTGGTGAATTTGCTGAGCCACAGTGGGATAATGGTTGTGAACAGTTTATGAATCTGCAGAAGTTTCCTTCTTATGAGATTGATTGGGCTTCTCTTTGA 1092 0.3837 MDFFNNSQDPFNGELMEVLEPFMKSSSTTPSSPPSLNSYLPSTSSSSPFYPSTPSFFQPSSFSPQPSSSFPSQPNFYTENGYGSSMMSYQFPPSLGDSSSNSQNNFIGFEQQPQPNSFIGLNNLTPSQINQIQAQIQFQAQQQQNNSTSLNFLGPKPIPMKQPGVPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDRAAYRLRGDFARLNFPNMKDQQGMFGEFKVLHSSIDAKLDAICESLGNSSDVKKQGKVEKGSKKKVLKKEVQSPQPLIVVENNDDDNNNNNNKVVIEGSSLSSPSEGSDDSSPLSDLTFGEFAEPQWDNGCEQFMNLQKFPSYEIDWASL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2502 363 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 362 - -
Mal8g2502 363 MobiDBLite consensus disorder prediction 292 328 - -
Mal8g2502 363 SMART rav1_2 172 235 IPR001471 GO:0003700|GO:0006355
Mal8g2502 363 MobiDBLite consensus disorder prediction 292 331 - -
Mal8g2502 363 MobiDBLite consensus disorder prediction 22 76 - -
Mal8g2502 363 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 362 - -
Mal8g2502 363 SUPERFAMILY DNA-binding domain 172 229 IPR016177 GO:0003677
Mal8g2502 363 PRINTS Ethylene responsive element binding protein signature 173 184 IPR001471 GO:0003700|GO:0006355
Mal8g2502 363 PRINTS Ethylene responsive element binding protein signature 195 211 IPR001471 GO:0003700|GO:0006355
Mal8g2502 363 CDD AP2 171 230 IPR001471 GO:0003700|GO:0006355
Mal8g2502 363 Gene3D AP2/ERF domain 172 230 IPR036955 GO:0003700|GO:0006355
Mal8g2502 363 Pfam AP2 domain 173 221 IPR001471 GO:0003700|GO:0006355
Mal8g2502 363 ProSiteProfiles AP2/ERF domain profile. 172 229 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2502 Mal-Chr8 56556322 56557413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2502 12 363 AP2-EREBP Transcription Factor Family AT1G78080 46.092 4.11e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g2502 AP2 8.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2502 K09286 - gmx:732559 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2502 8 56556322 56557413 Mal8g2502 8 56556322 56557413 ECH
Mal8g2502 8 56556322 56557413 Mal2g2543 2 32342305 32343381 PCT