Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2491 ATGACTAACCAAAATATGTTGGGAAAATCACGTGTAATTGTGAATGAGAGGATTTTGCAGTTAGCAATGTCGATTTCAAACTCTAATGGTTTACCAAGAACATCAGTACCTGAATTAATGGCTTTGTTTGGTGGTCTTTTGACCCAACCCAAAAACAATCTCATTAAATCTTTGGAAGATGGAAATGATCGCAAAGGAACGACTAAAGTTAACGCGTGGATCGATTCCATGAGAGCTTCTTCTCCTACTCGAACCAGAAACAATTCCGAAAATCGTGACCAAACTCATTGGACTCTTTTCCATCCTTCGGCGTTGAACATGTTCAATCAAATTTTGTACAATTCAAATGGGAAACAAATTGTAGTTTTTCTTGATTATGATGGAACTCTCTCACCAATTGTAGCAGATCCAGATAAAGCTTACATGACTAAAAAGATGAGAACAACATTGAAGGACATAGCAAAACATTTTCCCACAGCCATCGTTAGTGGAAGGTGCTTAGACAAGCTATTTAGCTTTGTAAGGTTAACAGAATTATACTATGCTGGAAGCCATGGGATGGATATCAAGGGACCAACAAATAGAAGAAGCACTAAGAAAGGTAATAATGATGAGGTACTTTTGCAGCCTGCAAGTGAATTCTTGCCTATGATCAATGAGGTTTATAAGATCTTGGTGGAAAAAACAAAGTGTATTCCAGGGGCTATGGTGGAAAATAACAAATTTTGTTTGTCTGTGCATTTTCGCAACGTTGATGAAAAGAGTTGGGCAATATTGGCTGAACAAGTAAGCTTAGTGCTGAATGAGTACCCAAAACTAAAGCTAACTCAAGGGAGAAAAGTGTTGGAAATTCGACCAACTATTAAATGGGACAAAGGAAGGGCTCTTGAATTTTTGTTAGAGTCACTTGGATTTGCAAATTCTAACAACGTATTTCCAATCTATATCGGCGACGATCGGACCGACGAAGATGCTTTTAAGGTTTTACGCAATAGGGGCCAAGGGAGTGGGATTCTTGTTTCTAAAATTCCAAAAGAAACCAATGCTTCTTACACTTTGCAAGATCCATCTGAGGTTGGACAATTTTTGCGGCATTTGGTGGATTGGAAAAGAACAAGTTCTCGTTCCTACAAGTTGTAG 1140 0.3833 MTNQNMLGKSRVIVNERILQLAMSISNSNGLPRTSVPELMALFGGLLTQPKNNLIKSLEDGNDRKGTTKVNAWIDSMRASSPTRTRNNSENRDQTHWTLFHPSALNMFNQILYNSNGKQIVVFLDYDGTLSPIVADPDKAYMTKKMRTTLKDIAKHFPTAIVSGRCLDKLFSFVRLTELYYAGSHGMDIKGPTNRRSTKKGNNDEVLLQPASEFLPMINEVYKILVEKTKCIPGAMVENNKFCLSVHFRNVDEKSWAILAEQVSLVLNEYPKLKLTQGRKVLEIRPTIKWDKGRALEFLLESLGFANSNNVFPIYIGDDRTDEDAFKVLRNRGQGSGILVSKIPKETNASYTLQDPSEVGQFLRHLVDWKRTSSRSYKL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2491 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 379 - -
Mal8g2491 379 TIGRFAM T6PP: trehalose-phosphatase 118 367 IPR003337 GO:0003824|GO:0005992
Mal8g2491 379 Pfam Trehalose-phosphatase 123 357 IPR003337 GO:0003824|GO:0005992
Mal8g2491 379 Gene3D - 202 287 - -
Mal8g2491 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 379 IPR044651 GO:0004805|GO:0005992
Mal8g2491 379 SUPERFAMILY HAD-like 121 370 IPR036412 -
Mal8g2491 379 CDD HAD_TPP 121 360 - -
Mal8g2491 379 Gene3D - 122 353 IPR023214 -
Mal8g2491 379 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 122 331 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2491 Mal-Chr8 56117138 56119409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2491 122 368 Trehalose Biosynthesis Gene Families AT1G70290 27.068 4.17e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2491 K01087 - gmx:100792915 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2491 8 56117138 56119409 Mal8g2491 8 56117138 56119409 ECH
Mal8g2491 8 56117138 56119409 Mal2g2541 2 32317212 32319298 PCT