Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2471 ATGGCTTTAAATCAAAGAAAAAAGGGATTAACAACGAAAATTTCCCAATTTACTATCAAGTCTGGAGCAAAAGCTTGCTTGATTGTGTATGATGACGATGGTAATGCAGAACCAATGACATGGACAGAAGATCCTACAATTGTTAACTCCATGCTTCAAGAATATGAGAATCTAAAGATTGAGAAAGCTGCTGAGATATTTGATGTGAGTGACTACTTTGAAAATAAGAAAGATGTTGTTGAAGCTGAAATTACCAAAGTTCGTAAAATTATCTTCAAGAACAAGTATCCAACTTGGCATCCAGATTTTAATAACATGGAAGAGAACCAACTCAGCGACTTCAATGCTACTATATATGCTAAGATTCAAGCTTCATCTCGCAAATGCAACACACCAACTGCTAATCAAACTGCTACAAATGTCATCTTGCAAAACAATGAGCATGTGGAGTGGAGTGATCAAACTGCTAATCATGATTATATTAGTGAGATGGTAGATCTCACTAGTTTTGGTTATTTGCCTTCTAGATCATCAACAAACCAACTTAGTCAACTTGTTGATCTTGATGACTGGATAATTCAACTTGATGATGGTGTTTTGCACTCGGCTAGTCGACCTGATCAATTTGCTTGGAAAGATCTTTCTTGTTTATCTCAAAATGAATAG 666 0.3559 MALNQRKKGLTTKISQFTIKSGAKACLIVYDDDGNAEPMTWTEDPTIVNSMLQEYENLKIEKAAEIFDVSDYFENKKDVVEAEITKVRKIIFKNKYPTWHPDFNNMEENQLSDFNATIYAKIQASSRKCNTPTANQTATNVILQNNEHVEWSDQTANHDYISEMVDLTSFGYLPSRSSTNQLSQLVDLDDWIIQLDDGVLHSASRPDQFAWKDLSCLSQNE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2471 221 Gene3D - 2 163 IPR036879 GO:0003677|GO:0046983
Mal8g2471 221 PANTHER PROTEIN, PUTATIVE-RELATED 2 202 - -
Mal8g2471 221 SUPERFAMILY SRF-like 4 60 IPR036879 GO:0003677|GO:0046983
Mal8g2471 221 PANTHER MADS BOX PROTEIN 2 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2471 Mal-Chr8 55335011 55335785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2471 5 128 Type I MADS-box Gene Family AT5G55690 27.132 3.39e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2471 - - mtr:MTR_4g107170 227.254