Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2466 ATGACTTTCAATCAAAGAAAAAAAGGATTAACAACGAAAATTTCCCAATTTACAATCAAGTCTGGAGCAAAAGCTTGCTTGATTGTGTATGATGATGATGGTAATGCGGGACCAATGACATGGCCAGAAGATCCTACAATTGTTAACTCCATGCTTCAAGAATATGAGAATCAAAAGATTAAGAAAACTCCTGAGATATTTGATGTGAACGACTACTTTGAAAATAAGAAAGATGTTGTTGAAGCTAAAATTACCAAAGTGCGTAAAGCTATCTTCAAGAACAAGTATCCAACTTGGCATCCAGATTTCAATAACATGGAAGAGAACCAACTCAGAGACTTCATTGCTACTATAGATGCTAAGATTCAAGCTTGTAATCACAAAATTAACATGCTGAATGGTGAAACTAGTTTCTTGCAAAACAATGCTGACATGACAGATGGTGTTGTTTTCTCACATTCAAACGAAGTAAATGTCATACGTAGCATCCCTCAAATGCAACTACACACCAAGAGTATTAGTGAGGTTGTGGTGATTGAGTTAGGCTCCAAGAAACGGTTTCCTCTTAGTAGTTTTTGTTTTCAGTTTTTTTTTTTCTTTTCCATTTGGATTTGTTTTCCGCTAGTTTTGATGTTCAAGCTTGCTTACAGAGGACTGGTCACAGGCACCAAAGCTAGGGTTTTTGAGAAAATCCTCTTGCAATATGGACTTGTACGCAAGATTTTGTGGGCTCTAACTGCTTCAACCAGAGATGCATGA 759 0.3676 MTFNQRKKGLTTKISQFTIKSGAKACLIVYDDDGNAGPMTWPEDPTIVNSMLQEYENQKIKKTPEIFDVNDYFENKKDVVEAKITKVRKAIFKNKYPTWHPDFNNMEENQLRDFIATIDAKIQACNHKINMLNGETSFLQNNADMTDGVVFSHSNEVNVIRSIPQMQLHTKSISEVVVIELGSKKRFPLSSFCFQFFFFFSIWICFPLVLMFKLAYRGLVTGTKARVFEKILLQYGLVRKILWALTASTRDA* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2466 252 SUPERFAMILY SRF-like 2 60 IPR036879 GO:0003677|GO:0046983
Mal8g2466 252 ProSiteProfiles MADS-box domain profile. 1 43 IPR002100 GO:0003677|GO:0046983
Mal8g2466 252 PANTHER PROTEIN, PUTATIVE-RELATED 2 148 - -
Mal8g2466 252 Gene3D - 1 79 IPR036879 GO:0003677|GO:0046983
Mal8g2466 252 PANTHER MADS BOX PROTEIN 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2466 Mal-Chr8 55234666 55238118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2466 2 128 Type I MADS-box Gene Family AT5G55690 27.273 5.29e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal8g2466 SRF-TF 8.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2466 - - mtr:MTR_4g045977 217.624