Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2465 ATGGGTCGTGCAAAAATAGCCATGAAATACATCCAAGATAAGAAATCTCGAAAAATGGCTTTAAATCAAAGAAAAAAGGGATTAACAACGAAAATTTCCCAATTTACTATCAAGTCTGGAGCAAAAGCTTGCTTGATTGTGTATGATGACGATGGTAATGCAGAACCAATGACATGGACAGAAGATCCTACAATTGTTAACTCCATGCTTCAAGAATATGAGAATCTAAAGATTGAGAAAGCTGCTGAGATATTTGATGTCAGTGACTACTTTGAAAATAAGAAAGATGTTGTTGAAGCTGAAATTACCAAAGTGCGTAAAATTATCTTCATGAACAAGTATCCAACTTGGCATCCAGATTTTAATAACATTGAAGAGAACCAACTCAGAGACTTCATTGCTACTATAGATGCTAAGATTCAAGCTTCATCTCGCAAATGCAACACACCAACTGCTAATCAAACTGCTACAAATGTCATCTTGCAAAACAATGAGCATGTGGAGTGGAGTGATCAAACTGCTAATCATGATTATATTAGTGAGATGGTGGATCTCACTAGTTTTGGTGATTTGCCTTCTAGTTCATCAACAAACCAACTTAGTCAACTTGTTGATCTTGATGACTGGATAATTCAACTAGATAATGGTGTTTTGCACTCGGCTAGTCGACCTGATCAATTTGCTTGGAAAGATCTTTCTTGTTTATCTCAAAATGAAGAGGGCAATGCAGAAAAGTAA 738 0.3591 MGRAKIAMKYIQDKKSRKMALNQRKKGLTTKISQFTIKSGAKACLIVYDDDGNAEPMTWTEDPTIVNSMLQEYENLKIEKAAEIFDVSDYFENKKDVVEAEITKVRKIIFMNKYPTWHPDFNNIEENQLRDFIATIDAKIQASSRKCNTPTANQTATNVILQNNEHVEWSDQTANHDYISEMVDLTSFGDLPSSSSTNQLSQLVDLDDWIIQLDNGVLHSASRPDQFAWKDLSCLSQNEEGNAEK* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2465 245 Gene3D - 13 75 IPR036879 GO:0003677|GO:0046983
Mal8g2465 245 PANTHER PROTEIN, PUTATIVE-RELATED 3 222 - -
Mal8g2465 245 SUPERFAMILY SRF-like 2 78 IPR036879 GO:0003677|GO:0046983
Mal8g2465 245 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 53 IPR002100 GO:0003677|GO:0046983
Mal8g2465 245 ProSiteProfiles MADS-box domain profile. 1 52 IPR002100 GO:0003677|GO:0046983
Mal8g2465 245 PANTHER MADS BOX PROTEIN 3 222 - -
Mal8g2465 245 SMART madsneu2 1 61 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2465 Mal-Chr8 55156650 55157709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2465 1 146 Type I MADS-box Gene Family AT5G55690 27.815 1.49e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal8g2465 SRF-TF 1.1e-07 No_clan