Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2451 ATGCCTCCCAAAATCGACCTTATCTCTGAAATTAGCCCAGTCAACGAGAATTGGAATGTGGTTGTTCGTATAATTCGTTTGTGGTTGGTAAGGGATGTTTCACGTGACAACCATCCATTTTCCCTTGACATGATCCTCATGGATTCCACTGGCAACAAAATTCACGCTACGGTGCGTCGTACTCTAATTTATAAGTTTGAAAAAGAACTGAAGGAGGATAATGTGTACTCGATGACCAATTTTGGAGTTGCTTCAAATGGTGGTTCATATAGGACCACCAAACATGAGTATAAACTCAATTTTCAGTTTGGAACAAAGGTCAAAACCTCTGATTCCAAAAAAGTTCCTTTTAGCATCTATCCTATTGAGAGTCCTGCACAAGTTTTTGCTACTGATTACAATACAGATTATCTGTATGACATCATGGGAATTTTAACCGGTGTTGGAACACAAAGGGAGTATGAACGCAATGGTTTGAAGACCAAGATGATTGCTATTCAGTTGGACTTTGATGGTTTCAAATTCAAAGTAACTTTGTTTGGACAATATGTGGACGAACTTAATGCTTTCGTCGCGGCTGGTGAGAGTGAAAATGCTTTGGTTGTTGTTTTGATGGCTAAAATCAAAATATGGCAGGGTTCTGCAACTGTTCAAAATTCTATGAACTCGACCAAGTTGTTATTTAATCCAGATCTTATATCTGCCAAGGATTTGAAAAAGAGGATGCTTGAGAAAAACGATTCCCCTTCTCCTGGAATTTGCTTGATCCAGGATCCTGCTAAGTTGAGTGACGAAGATGACTTCTTAAAAGTCACTCCTAGGATTACCTTGGAGGGTCTGAAAGAATGTGGAGTGGTAAAAATTAATTAA 870 0.3874 MPPKIDLISEISPVNENWNVVVRIIRLWLVRDVSRDNHPFSLDMILMDSTGNKIHATVRRTLIYKFEKELKEDNVYSMTNFGVASNGGSYRTTKHEYKLNFQFGTKVKTSDSKKVPFSIYPIESPAQVFATDYNTDYLYDIMGILTGVGTQREYERNGLKTKMIAIQLDFDGFKFKVTLFGQYVDELNAFVAAGESENALVVVLMAKIKIWQGSATVQNSMNSTKLLFNPDLISAKDLKKRMLEKNDSPSPGICLIQDPAKLSDEDDFLKVTPRITLEGLKECGVVKIN* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2451 289 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 19 283 - -
Mal8g2451 289 PANTHER REPLICATION FACTOR A 1, RFA1 19 283 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal8g2451 289 SUPERFAMILY Nucleic acid-binding proteins 4 111 IPR012340 -
Mal8g2451 289 CDD RPA1_DBD_B_like 140 242 - -
Mal8g2451 289 CDD RPA1_DBD_A_like 20 107 - -
Mal8g2451 289 Pfam Domain of unknown function DUF223 44 115 IPR003871 -
Mal8g2451 289 Gene3D - 112 249 IPR012340 -
Mal8g2451 289 SUPERFAMILY Nucleic acid-binding proteins 131 241 IPR012340 -
Mal8g2451 289 Gene3D - 5 111 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2451 Mal-Chr8 54618899 54620193 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2451 2 258 Core DNA Replication Machinery Family AT4G19130 18.939 3.05e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2451 - - mtr:MTR_2g048560 365.155