Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2439 ATGGCTGATTCACTCACAGTTAATGTTGATTCCTCACCTAAGCTTGAATTGTATGCTAAACAAAAAAAGAATACCACCTATGAGGCTGAAAAATCTCCATCTAGTATCCAAAAGGCTATTGCTGAATTTGTGGGTACATACATTCTTATATTTGCTGGTTGTGGGGCTGTTCTTGTCAACGAGAAGTTACCAATCACAGTAGTTGGCATAGCAATTGTTTCAGGTTTAGCTTTAACCGTCGCAATATATTCGGTCGGTCATGTCTCCGGTGCTCATTTCAATCCCGCCGTCACAATTGCCTTGGCCGTTGTCCAAAAAATTCAATTCAAACTCGTGCCTGTTTATGTGGTATGTCAGTTGATGGGTGCCACACTGGCCACACTCACCCTCAAAGTGTTGTACCATGATAAGGTGGAAATTGGTGTAGCCTTGACCCAATTCTCAAACCCAACTTCTTATCTTGAAGCATTGGTCTGGGAATCTATAATTACTTTCATATTGGTGCTAACTATTTGTGGTGTTGCCACTGATCATAGAGGGAGCAATGATCTTGCTGGAGTTGCAATAGGCCTTTCAGTTCTGATTAATATCGTCATTGCCGGGCCTACCACAAGAGCTTCGATGAATCCTGCAAGGAGTTTAGGACCTGCCATAGTATCAGGAAATTACAAAAACATTTGGGTTTATATCATAGGACCAACTATTGGAGCAGTTTTTGCAACTGTGCTTTACACATTCCTAAGAGTAACAAAACCAACACAACCAGAACCAGAATCATATCATGTCTGA 789 0.4132 MADSLTVNVDSSPKLELYAKQKKNTTYEAEKSPSSIQKAIAEFVGTYILIFAGCGAVLVNEKLPITVVGIAIVSGLALTVAIYSVGHVSGAHFNPAVTIALAVVQKIQFKLVPVYVVCQLMGATLATLTLKVLYHDKVEIGVALTQFSNPTSYLEALVWESIITFILVLTICGVATDHRGSNDLAGVAIGLSVLINIVIAGPTTRASMNPARSLGPAIVSGNYKNIWVYIIGPTIGAVFATVLYTFLRVTKPTQPEPESYHV* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2439 262 SUPERFAMILY Aquaporin-like 33 257 IPR023271 -
Mal8g2439 262 PANTHER AQUAPORIN NIP2-1 1 259 IPR034294 -
Mal8g2439 262 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 CDD MIP 37 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 ProSitePatterns MIP family signature. 92 100 IPR022357 -
Mal8g2439 262 Gene3D Glycerol uptake facilitator protein. 4 260 IPR023271 -
Mal8g2439 262 Pfam Major intrinsic protein 31 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 TIGRFAM MIP: MIP family channel proteins 41 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g2439 262 PANTHER MAJOR INTRINSIC PROTEIN 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2439 Mal-Chr8 54228963 54230750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2439 32 259 Major Intrinsic Protein MIP AT5G37820 48.305 2.15e-67 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2439 K09874 - gmx:100798380 380.563