Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2429 ATGGCTTATCCACATTATCGATCACAATTTGGAGACACAACATTCACTAAGGTTTTTGTCGGAGGACTAGCTTGGGAAACTCCAACTGATGAAATGAGGACATATTTTGAACAATTTGGTGATATTCTTGAAGCTGTCATTATCACTGATAAGAACACAGGAAAATCTAAAGGATACGGATTTGTAACATTTCGTGATCCAGAATCAGCTAGAAGAGCTTGTGTTGATCCAAATCCAGTAATAGATGGAAGAAGAGCTAATTGTAACATTGCTTCTCTAGGACGTCCTAGACCATCACCACCTAGAGGGAGGGGTACATATCAAGGTGGGGGTGTGGTGACAGGAGCACCAGGAGCGACAACGGCGTATGGTGGTGTTCCGGCAGGAGGGCCACCACAAATGGCAGCAGGAGCAACAGCAGCTCCAGTAATGTACCAACCATATGGCTACCCTACCTACACTCCTGAATACGGGTACCATCAAGCCACAATGTATAACCCTCAGATGCAACAAGCACAATACTTTCAACAACTCTATGGACCTTCATCTTCAACAATGGCCTCACCATATTACTATGGCTATTCTGTCCAAGCAGCTGCACCAAGGGGTACATTTTCAACACCCCAACCACATCGCATACAAACTGGACCATCCTATCTATACTACCCTACTACACCAATGGAAGGAGCTTCTTTCTCTGCTGCTTATCGTCCAGTTCAACAACCATTAATAAGGCATCCTTCTCCTTCCCCTTCTCCTAGTGATTCACAGACTCAGCAACGTACCTCATCAGAGACAGCATCTGGAGTAGTTATAACTTCAGAAAGTTCAAATACCCAAGGGAAGAACAACAACTAA 858 0.4441 MAYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACVDPNPVIDGRRANCNIASLGRPRPSPPRGRGTYQGGGVVTGAPGATTAYGGVPAGGPPQMAAGATAAPVMYQPYGYPTYTPEYGYHQATMYNPQMQQAQYFQQLYGPSSSTMASPYYYGYSVQAAAPRGTFSTPQPHRIQTGPSYLYYPTTPMEGASFSAAYRPVQQPLIRHPSPSPSPSDSQTQQRTSSETASGVVITSESSNTQGKNNN* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2429 285 MobiDBLite consensus disorder prediction 237 285 - -
Mal8g2429 285 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
Mal8g2429 285 Gene3D - 3 112 IPR012677 -
Mal8g2429 285 MobiDBLite consensus disorder prediction 250 285 - -
Mal8g2429 285 PANTHER GEO13361P1-RELATED 1 273 - -
Mal8g2429 285 SMART rrm1_1 17 89 IPR000504 GO:0003723
Mal8g2429 285 PANTHER - 1 273 - -
Mal8g2429 285 CDD RRM_RBM24_RBM38_like 16 91 - -
Mal8g2429 285 SUPERFAMILY RNA-binding domain, RBD 9 115 IPR035979 GO:0003676
Mal8g2429 285 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2429 Mal-Chr8 53710406 53717148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2429 12 92 C2H2 Transcription Factor Family AT2G19380 39.506 5.16e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2429 K25006 - gmx:100787086 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2429 8 53710406 53717148 Mal8g2429 8 53710406 53717148 ECH