Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2424 ATGAATCCAAATGATCTTCAGCCTCTACCTTTGCTAAGTAGCTTCCTAGGTTCAACTCCACAAGAAACTTCACTACAAAATGAAATTCATAAATCATGTTCTAATCTAGCTGAAGATGTCACAGTGGCTTTACACATAGGCCTTCCTGATTCAAGTGAATCACCAATTGAAAATGGATTTGTGAATGTCCCAAATCATGTTCCTAACAATTACTGGATACCAACTCAAGAACAAATTCTCATTGGATTCAGTCATTTCTCTTGCCCTGTTTGCCTCAAAACCTTCAATCGTTACAACAACCTTCAGGTGTAG 312 0.3782 MNPNDLQPLPLLSSFLGSTPQETSLQNEIHKSCSNLAEDVTVALHIGLPDSSESPIENGFVNVPNHVPNNYWIPTQEQILIGFSHFSCPVCLKTFNRYNNLQV* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2424 103 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 5 103 - -
Mal8g2424 103 PANTHER ZINC FINGER PROTEIN WIP2 5 103 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2424 Mal-Chr8 53599181 53599492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2424 40 103 C2H2 Transcription Factor Family AT1G34790 48.750 1.35e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal8g2424 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2424 - - cam:101491653 176.792