Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2406 ATGGTCGAAATCGTCTGTTGCGGTTACAATTCTAAACAACACTTTAACATCAAGGAACATTCCGAGGATGAAATCAACAAACCTCTTGAGGTAACTTCTGGAGTTGTTGTCTTCTTTGGCTTTTTCGATAGTCCTTGGAGTGATGATGATGATGATGATTCTCCAAAAGAAGCAGTATCTGTTATAAAGATATCATCATCAAGAATGGCAACACAATCTGAACTCCTTAGTTATGAATTGGCCAAGTGCGATGAGTTTTCCTCCAACCTGTTACAAGATATAACCGGAGGGAGATTAGGATGTCCTCGATCGGAAGACATGAATACAACAAATGGTGTAAAAACAAGTGGCGTAACGTCTGCAGTTCATGAGTTCCGTAATGGTTTTTGTTCCGCTCTTAGGGATCTGCGAGGATTCCACGAAATCCTACGTAAACTTAGCCAAAAGCTTGATAACTCATTACGGTCATTTGCTGATACAATAAGCAATTTATCATTGTGGCAGTCTGAACAAGAGGATACAGGAATTCTTAACTCATCATCATCATTTTACCTTTCCCAACTTATAGCTAAGCTACGTGACTTGCATAAATTTGCCAAGGTCGATGCAGAATCTTATAAAGAATTTGAACATTGGAAACAAGTGCTTAAAATTGATGCTATCAACTTATGCAAGGAAAACAATTACAATACAGGATTTTTTGAGAGTTCTGATAACATTGTTGCTGATGTATATGAACTGAAGGTCAGACTTGAGCATATCCTTAAGAGGATTGTAATAATATCTGAGGCTGCAAGGACAGAAACACCATCTGAAGTTACCAGTAATTTGTTCATCGGTGGAGTACTATCTGCAAGAGCCGTATACACGTTGCAGCACTTGAGAATCACTCATATTTTGTGTTTGTGTACTAACGATATTGGACAGTCAGATTCTCAATTTCCTGATCAATTCACATATAAAAATTTCCCTGTAAGTCATCTTGATTCTAACATCAGCAGCTTATTTGATGAAGCTTGTGATTTTATAGATTCTGCTGAGAAAACAGGTCAGAGAGTTTTAGTTCATTTCTTTGAAGGGAAAAGCAGAAGTGTCACTGTGGTCCTTGCTTACTTGATGATCATGAAGTAA 1131 0.3767 MVEIVCCGYNSKQHFNIKEHSEDEINKPLEVTSGVVVFFGFFDSPWSDDDDDDSPKEAVSVIKISSSRMATQSELLSYELAKCDEFSSNLLQDITGGRLGCPRSEDMNTTNGVKTSGVTSAVHEFRNGFCSALRDLRGFHEILRKLSQKLDNSLRSFADTISNLSLWQSEQEDTGILNSSSSFYLSQLIAKLRDLHKFAKVDAESYKEFEHWKQVLKIDAINLCKENNYNTGFFESSDNIVADVYELKVRLEHILKRIVIISEAARTETPSEVTSNLFIGGVLSARAVYTLQHLRITHILCLCTNDIGQSDSQFPDQFTYKNFPVSHLDSNISSLFDEACDFIDSAEKTGQRVLVHFFEGKSRSVTVVLAYLMIMK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2406 376 Pfam Dual specificity phosphatase, catalytic domain 288 373 IPR000340 GO:0008138|GO:0016311
Mal8g2406 376 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 269 374 IPR029021 -
Mal8g2406 376 ProSiteProfiles Dual specificity protein phosphatase domain profile. 269 376 IPR020422 GO:0006470|GO:0008138
Mal8g2406 376 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 13 82 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2406 376 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 187 376 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2406 376 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 84 181 - -
Mal8g2406 376 Gene3D Protein tyrosine phosphatase superfamily 251 376 IPR029021 -
Mal8g2406 376 SMART dsp_5 269 376 IPR020422 GO:0006470|GO:0008138
Mal8g2406 376 CDD DSP 270 376 - -
Mal8g2406 376 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 84 181 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2406 376 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 13 82 - -
Mal8g2406 376 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 187 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2406 Mal-Chr8 53004988 53008121 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2406 13 82 Protein tyrosine phosphatase (PTP) family AT5G23720 54.167 3.88e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2406 K14165 - jre:109000311 331.257