Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2403 ATGAAATCAACAAAGCTCTTGAGGTACTTCACTGGTTTTTGTTCCGCTCTTAGGGATCTGCGAGGATTCCACGAAATCCTACGTAAACTTAACCAAAAGCTTGATAACTCATTACGGTCATTTGCTGATACAATAAGCAATTTATCATTGTGGCAGTCTGAACAAGAGGATACAGGAATTCTTAACTCATCATCATCATTTTATGTTTCCCAACTTATAGCTAAGCTACGTGACTTGCATAAATTTGCCAAGGTCGATGCAGAATCTTATAAAGAATTCGAACATTGGAAACAAGTGCTTAAAATTGATGCTATCAACTTATGCAAGGAAAACAATTACAGTACAGGATTTTTTGAGAGTACTGATAACATTGTTGCTGATGTATATGAATTGAAGGATTCTAACATCAGCAGCTTATTTGATGAAGCTTGTGATTTTATAGATTCTGCTGAGAAAACAGGTCAGAGAGTTTTAGTTCATTTCTTTGAAGGGAAAAGCAGAAGTGTCACTGTGGTCCTTGCTTACTTGATGATCATGAAGAAGTTGAGTTTATTAGAACGATGGAGTGATCTGAAACAAGTTCACCCTCGAGCACAGCCGAATAAAGGGTTTGCAAAGACCTTATCGGAACTTGATCAGAAACTGCATGGGGAAGGTTTCAATGGAGTGGCAGCAGCTCAAAATGGCGATGAAAATCTGTCATATTTGTGGCAAGAATTCTGGAATGACTAA 732 0.377 MKSTKLLRYFTGFCSALRDLRGFHEILRKLNQKLDNSLRSFADTISNLSLWQSEQEDTGILNSSSSFYVSQLIAKLRDLHKFAKVDAESYKEFEHWKQVLKIDAINLCKENNYSTGFFESTDNIVADVYELKDSNISSLFDEACDFIDSAEKTGQRVLVHFFEGKSRSVTVVLAYLMIMKKLSLLERWSDLKQVHPRAQPNKGFAKTLSELDQKLHGEGFNGVAAAQNGDENLSYLWQEFWND* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2403 243 CDD DSP 100 210 - -
Mal8g2403 243 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 217 IPR020422 GO:0006470|GO:0008138
Mal8g2403 243 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 133 218 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2403 243 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 71 132 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2403 243 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 11 66 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2403 243 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 133 218 - -
Mal8g2403 243 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 71 132 - -
Mal8g2403 243 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 11 66 - -
Mal8g2403 243 Pfam Dual specificity phosphatase, catalytic domain 96 213 IPR000340 GO:0008138|GO:0016311
Mal8g2403 243 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 127 215 IPR029021 -
Mal8g2403 243 Gene3D Protein tyrosine phosphatase superfamily 83 232 IPR029021 -
Mal8g2403 243 SMART dsp_5 81 214 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2403 Mal-Chr8 52991292 52993672 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2403 132 218 Protein tyrosine phosphatase (PTP) family AT5G23720 64.368 1.30e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2403 K14165 K17614 ahf:112770730 130.568