Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2398 ATGGTTGTGATTAGTGAGTTACCTAGTGATGTTGATGCTAATAAGGAAGCAATATTGGATGCAAGATTCTTATCCTTTCTTGAGAAAGATGATTCTTTTCTTACTCCATGGAGTTGGGATCCTAAGGCTTCTAAGAATGAGAGTAGCCCTAGTAAAGAAAAGGAGTATATTTCTATTCATCGTGAATCATACTTTTCTTATGAGATTATTGGTCAAAAGGGTAGCAACAATGTTAAAGAAATGGTTCAAAGAATGCCCGAATCTTTTATTAGTGATGAAGAAAATTACATTCAAGCCTCGTTGTTTGCAAGTTGGACATTATCCAGCTCTGTTTCTTGGGACAGCACTTTAACATCAAGGAACATTCCGAGGATGAAATCAACAAAGCTCTTGAGGTACTTCACTGGTTTTTGTTCCGCTCTTAGGGATCTGCGAGGATTCCACGAAATCCTACGTAAACTTAACCAAAAGCTTGATAACTCATTACGGTCATTTGCTGATACAATAAGCAATTTATCATTGTGGCAGTCTGAACAAGAGGATACAGGAATTCTTAACTCATCATCATCATTTTATGTTTCCCAACTTATAGCTAAGCTACGTGACTTGCATAAATTTGCCAAGGTCGATGCAGAATCTTATAAAGAATTCGAACATTGGAAACAAGTGCTTAAAATTGATGCTATCAACTTATGCAAGGAAAACAATTACAGTACAGGATTTTTTGAGAGTACTGATAACATTGTTGCTGATGTATATGAATTGAAGTCAAATTCTCAACTTCCTGATCAATTCACATACAAAAATTTCTATGATTCTAACATCAGCAGCTTATTTGATGAAGCTTGTGATTTTATAGATTCTGCTGAGAAAACAGGTCAGAGAGTTTTAGTTCATTTCTTTGAAGGGAAAAGCAGAAGTGTCACTGTGGTCCTTGCTTACTTGATGATCATGAAGAAGTTGAGTTTATTAGAACGATGGAGTGATCTGAAACAAGTTCACCCTCGAGCACAGCCGAATAAAGGGTTTGCAAAGACCTTATCGGAACTTGATCAGAAACTGCATGGGGAAGGTTTCAATGGAGTGGCAGCAGCTCAAAATGGCGATGAAAATCTGTCATATTTGTGGCAAGAATTCTGGAATGACTAA 1149 0.3681 MVVISELPSDVDANKEAILDARFLSFLEKDDSFLTPWSWDPKASKNESSPSKEKEYISIHRESYFSYEIIGQKGSNNVKEMVQRMPESFISDEENYIQASLFASWTLSSSVSWDSTLTSRNIPRMKSTKLLRYFTGFCSALRDLRGFHEILRKLNQKLDNSLRSFADTISNLSLWQSEQEDTGILNSSSSFYVSQLIAKLRDLHKFAKVDAESYKEFEHWKQVLKIDAINLCKENNYSTGFFESTDNIVADVYELKSNSQLPDQFTYKNFYDSNISSLFDEACDFIDSAEKTGQRVLVHFFEGKSRSVTVVLAYLMIMKKLSLLERWSDLKQVHPRAQPNKGFAKTLSELDQKLHGEGFNGVAAAQNGDENLSYLWQEFWND* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2398 382 CDD DSP 258 349 - -
Mal8g2398 382 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 194 256 - -
Mal8g2398 382 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 132 189 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2398 382 Gene3D Protein tyrosine phosphatase superfamily 209 370 IPR029021 -
Mal8g2398 382 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 266 357 IPR029021 -
Mal8g2398 382 SMART dsp_5 205 353 IPR020422 GO:0006470|GO:0008138
Mal8g2398 382 Pfam Dual specificity phosphatase, catalytic domain 221 352 IPR000340 GO:0008138|GO:0016311
Mal8g2398 382 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 194 256 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2398 382 ProSiteProfiles Dual specificity protein phosphatase domain profile. 192 356 IPR020422 GO:0006470|GO:0008138
Mal8g2398 382 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 257 357 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mal8g2398 382 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 132 189 - -
Mal8g2398 382 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 257 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2398 Mal-Chr8 52961021 52965996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2398 256 357 Protein tyrosine phosphatase (PTP) family AT5G23720 59.813 1.24e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2398 K14165 K17614 ming:122071214 160.614