Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2387 ATGCCTTATTCAGTAGAGAAGGAGAAGGCGACGTATAGGCCTAAGCAAGATGTGGAATTCGGAACTTGTTTTGGTATTTCTGGTTTTTCAACAACATCATTCCTTTTCATAAATAAAGGAGATATTAGGCTTAAGAATGTTCCAATAGCTGTTACCCCTGAAGGGTTTTGTTATTGTCCTTCACTTGTTGTGTTTCAGAGAAGTCATAAGTCTCAAAAATTATTGTTCAGAAAAAGTCGGCTGCAGTGCAACGATTGTGAGGATCTTGAAATATATGTTGAAGCTGTTGGTTTGATGCACTGCAAGGAAAAGAAACAGCGGCTTATGAAACTGAATGGTCCTCGTGTTCTTCGAATTCTCAAGATCGTGGCTTTGATTAGAGTTTATCATTGTGCTACTGGTAGAGTACAATTTGGTTGTTTTTGTGCCGCTTTGAATGTGCAAAAGGGAAATGAAGCTTCTCGGGACAATAATAATTCCGAGAATCCTAGCGGTTCGCGGAAGTTAAGTTGCAGATTTTGTGGATTAAAATTTGATTTACTTCCTGATCTCGGTGGCCATCACCAAGCTGCTTATATGGAACACAATCTTGCTTGCAGGCGTTTGGCGAAGAAGGGAGTTTCTTATTATTCCCAGAGACTAAAATCAGGCAGATTTGACAGTCCCAAATTTAAAAGAGGTTTGGCAAAAGCATCAAATAGGATCAAGAGAAGGGCTAAAGTTAATTTGAAGAGAAGAAATCAAGCAATAAAGTTACATGAGAGGGGGGAAACATCCATGCAGCAGTCTCATGTAAACGCGACAACAATTTCTGCTGAATTAGAAGAACCTCAATGCTTAGAAGTTGCTACTTTAGCGCTTCTCTTGATCCTATTTGATGCTTTTGCCAAACCTCTTTTGAATTTGGGACTGTCAAGTCTGCCTGATTTTAGTCTTGGGCATAATAACGAACTCCCTTCTTCGCCAAACGCCTGTGAGCAAGATTGCGCTCCATATAAGCAGCTTGGTGATGGCCACCGAGATCAGATTGCTTTGGGTGAAGAACTAATTTATAATTGTTACTATGAGCTTGTGGATGGAGAAGGATCTCCTTATCTTTGTGGATCTTCAAAGTGTCGGGGTCGCCTGTACTAG 1134 0.4048 MPYSVEKEKATYRPKQDVEFGTCFGISGFSTTSFLFINKGDIRLKNVPIAVTPEGFCYCPSLVVFQRSHKSQKLLFRKSRLQCNDCEDLEIYVEAVGLMHCKEKKQRLMKLNGPRVLRILKIVALIRVYHCATGRVQFGCFCAALNVQKGNEASRDNNNSENPSGSRKLSCRFCGLKFDLLPDLGGHHQAAYMEHNLACRRLAKKGVSYYSQRLKSGRFDSPKFKRGLAKASNRIKRRAKVNLKRRNQAIKLHERGETSMQQSHVNATTISAELEEPQCLEVATLALLLILFDAFAKPLLNLGLSSLPDFSLGHNNELPSSPNACEQDCAPYKQLGDGHRDQIALGEELIYNCYYELVDGEGSPYLCGSSKCRGRLY* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2387 377 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 339 377 - -
Mal8g2387 377 PANTHER SET DOMAIN PROTEIN 339 377 - -
Mal8g2387 377 PANTHER SET DOMAIN PROTEIN 143 285 - -
Mal8g2387 377 Pfam Zinc finger C2H2-type, 3 repeats 147 193 IPR040689 -
Mal8g2387 377 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 143 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2387 Mal-Chr8 52436619 52442827 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2387 157 251 C2H2 Transcription Factor Family AT2G23740 53.125 1.83e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2387 - - mtr:MTR_8g078490 196.823