Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2381 ATGGAAGAACTTATTTGTGTTGAAAATCGTCAAGATGACATATTGAAACTTGATGACAAACTCATTGAACTGAGCGACGATTCATTACTTGTAATGGAAGATTCATCTAGTGAAGACCAAATGAATTCATCTAGCTATCAAGAATTTGAAGAAATTAGTGTGGATAAGTTTCAAGGTGAAACATCACAAAACAGAACAGAAGTAGAATTGTCATTTTCTAAATTGTTGGAGGTGGATGAGCCTGTGGCTGTGTGGTTCAAGTGGAGAGGGAAGTGGCATGCAGGCATCAAATGTGAAAGGACTGATTGGCCATTATCAATTGTGAAAGTTAAACCAGCCGATGATGAGGAGAACAAATATTTTGTCATTTATTCTCCAGAAGCAAGGAATTATTCATGGGTTGATATGCTTCTCATTCAATCAATTGATGAGTTTCCTCAACCTATACCATATAAAACTCATCAAGAAGGATTGAAATTGCTCGCCGTTGAAATGCTTTACATTGTTGATCAGATTCATCTTAATGCTTTGATAGAAGATGCTCGTAATGTGACGGTTTGGAAGCAGTTTGCTACGGAAGCTTCTCATTGTCGTTGTTATTCAGATCTTGGAAGAATGCTTCAGAGGCTGCAAAATAACATAATGCAACACTATATCAAAGCTGATTGGAAACTGCATTCCTTTGAGTCTTGGCCTGAAAGATGTCAGAGTGCAAACACTGCTCAAATAGTAGAGCTACTTCAGGAGGAATTGTTTGATTCTATTTTGTGGAATGATGTCCACGCTCTCCGTGAAGCACCATCACAACAAAAAATAGGTGATGAAGGGAAAACATGGAGCGATGATGTAATGAAATGGTTTTGCACACTTCCTTCTGTTTCTGGTAGCAACAACACACAACAACATGCTTCTGGCTCTGATGCTTTGCACCGAGTAGGCCTTCAAGTTGGTAGCAAAAGGCCTAAACTTAAAGTTCGCTGCGCATATACACATTCTAGAGATGAAGATATTGTGGAGGTACCTGTGGAAACTGAGCTTCCTAGTCAATTGATCAGTCCAGTGAGTGAAATCGCAGTCGATCCTGCGATCATGTTCAACAATGAAACAATATCAAGGCATATCGATGAAATGGATATTCAAGCATTTGTAGAACCTCGTACTCAGGATGGTAGTGAGCATCGGCAATGTCAAGCATATATTGAAGCCAAGGGAAGGCAGTGTGTGAGAACGGCAATTGAAAAACGTGTTAAAGTTCTTACTCCAACTTGTGGAGGTACAACTACTGCTGGTACTAAATGTAAGCATAATTCCCTTCCCAACTTTGCATTTTGCAAGAAAAATCTGTGCAATGGTGACACGAATAGGATCTCAAATTTAAACCTTCGTACGTTGAAGAGGAAAGCTGAAGAAAGTTGTAGTGGTGAAATCCTTATGCTTTCCGGCAATGATCACAATGAAATTGAGACTGCTAATAAGTGCAAGATCTGCTTTGAAGAATTTTCAAATGACCGAACACTTGGCGATCATTGGATGGAAAATCATAAAAAGGAAGCACAATGGTTGTTCAGAGGTTATGCTTGTGCCATTTGTTTTGATTCCTTCAGTAACAAAAAACTATTGGAATCACATGTTCAGAAGAGACACAACGTTCCGTTTGTTGAACAATGCTTGCTCTTACTATGTATTCCTTGTGGTAGTCAATTCGGAAATATGGATGAATTATGGTTGCATGTTAAGTCAGTTCACCCTGCCGAATTTAAGCTCTCGAATGCTCCTGAGCAACTAACTTTGTCTATCAGTGATGATTCTCCGAAAATGATTGAGCAGGGAAATAAAGCTTCATTGGACAATGATAATTCCGAGAATCCAGGTGATTTGCGAAAATTAAGTTGCAGGTTTTGTGGTTTGAAATTTGATTTACTTCTTGATCTCGGTCGCCATCACCAAGCTGCTCATATGGAGCGCAATCTTTCTCGCAGGCGTTTGGCGAAAAAGCGAGTTCGTTACTATACTCAAATACTAAAATCAGGCAGCCTTGGCCAACATGAGAAGGGGGAAACATCCATGCAGCTGTCTCATGTAAACGAGACAACATGTACTGCTGAATTGGAAGAACCTCATTGCTTAGAAGCTGCTAGTATTTTGTCTTCTGATATTCACGAGACTCAACCCCGGCCAAACAATTTAGATATTTTATCAATCGCTTGCACTGCATGCTGCAAATTTAATCTTGAGGCCTCATTGAAGGAGAATGATGAGTCTCAACCCATCATCAATTCAAACCATATAAGATTAGGGTCATCACAAAAGACTCTAGTGTTATGTGATGACATAAGCTTTGGGATGGAATCAACTCCAATCATTTGTTTTGTAGATCAACAAATTCTTAACTCTCTTTTTGAGCAAGAGCAACATATAAGAATTCCTAGACCTTGGGAGAGCTTTACATATGTGATAAAATCGATGATTGATTTCTCACCTAGTCTTGCTTATGAGGGTCTGCAATTGAAATGTTATTGCTCATCTTCTACCTGTTGTCGTGAAACTTGCGATCACGTATATCTTTTTGATAATGATTATGATACTGCAAAAGACATATACGGGGAATCAATGTGCGGCAAGTTTCCATATGACAACAATGGTCGAATCATATTGGAGGAAGGTTATCTTGTATATGAGTGCAATGATAATTGCAAATGTGATAAAACCTGCCCAAACAGGATATTGCAAAATGGAATTCGTGTTAAGTTGGAAGTCTTTAAAACTGAGAAAAAGGGATGGGGTGTAAGGGCTAGCGAGGCTATTTCGCGCGGCAGATTTGTGTGTGAGTACATTGGAGAGGTTTTAGATGAGCAAGAGGCACATAACAGACGCGACAGATATGGAAAAGAACATTGCAATTATTTCTACAATGTTGATGCTTGTGTTAATGATATGAGCCGATTAGTCGAAAGACATGCCCGATATGTCATCGACTCTACTAGATATGGAAATGTGTCCAGATTCATCAACAACAGTTGTTCACCCAATCTTGTGAATTACCAAGTTCTTGTAGAGAGCATGGATTGTAAACGTTCACATATCGGTTTTTATGCAAGTCGTGATATTGCTTTGGGTGAAGAATTAACTTATAATTATCACTATGAGCTTGTTGATGGAGAAGGATCTCCTTGTCTTTGTGGATCTTCGAAGTGTCGGGGTCGCTTGTACTAG 3213 0.3918 MEELICVENRQDDILKLDDKLIELSDDSLLVMEDSSSEDQMNSSSYQEFEEISVDKFQGETSQNRTEVELSFSKLLEVDEPVAVWFKWRGKWHAGIKCERTDWPLSIVKVKPADDEENKYFVIYSPEARNYSWVDMLLIQSIDEFPQPIPYKTHQEGLKLLAVEMLYIVDQIHLNALIEDARNVTVWKQFATEASHCRCYSDLGRMLQRLQNNIMQHYIKADWKLHSFESWPERCQSANTAQIVELLQEELFDSILWNDVHALREAPSQQKIGDEGKTWSDDVMKWFCTLPSVSGSNNTQQHASGSDALHRVGLQVGSKRPKLKVRCAYTHSRDEDIVEVPVETELPSQLISPVSEIAVDPAIMFNNETISRHIDEMDIQAFVEPRTQDGSEHRQCQAYIEAKGRQCVRTAIEKRVKVLTPTCGGTTTAGTKCKHNSLPNFAFCKKNLCNGDTNRISNLNLRTLKRKAEESCSGEILMLSGNDHNEIETANKCKICFEEFSNDRTLGDHWMENHKKEAQWLFRGYACAICFDSFSNKKLLESHVQKRHNVPFVEQCLLLLCIPCGSQFGNMDELWLHVKSVHPAEFKLSNAPEQLTLSISDDSPKMIEQGNKASLDNDNSENPGDLRKLSCRFCGLKFDLLLDLGRHHQAAHMERNLSRRRLAKKRVRYYTQILKSGSLGQHEKGETSMQLSHVNETTCTAELEEPHCLEAASILSSDIHETQPRPNNLDILSIACTACCKFNLEASLKENDESQPIINSNHIRLGSSQKTLVLCDDISFGMESTPIICFVDQQILNSLFEQEQHIRIPRPWESFTYVIKSMIDFSPSLAYEGLQLKCYCSSSTCCRETCDHVYLFDNDYDTAKDIYGESMCGKFPYDNNGRIILEEGYLVYECNDNCKCDKTCPNRILQNGIRVKLEVFKTEKKGWGVRASEAISRGRFVCEYIGEVLDEQEAHNRRDRYGKEHCNYFYNVDACVNDMSRLVERHARYVIDSTRYGNVSRFINNSCSPNLVNYQVLVESMDCKRSHIGFYASRDIALGEELTYNYHYELVDGEGSPCLCGSSKCRGRLY* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2381 1070 Gene3D Classic Zinc Finger 491 549 - -
Mal8g2381 1070 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 486 1070 - -
Mal8g2381 1070 PANTHER SET DOMAIN PROTEIN 2 476 - -
Mal8g2381 1070 Gene3D SET domain 767 1070 IPR046341 -
Mal8g2381 1070 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 2 476 - -
Mal8g2381 1070 Pfam SET domain 926 1046 IPR001214 GO:0005515
Mal8g2381 1070 PANTHER SET DOMAIN PROTEIN 486 1070 - -
Mal8g2381 1070 Pfam Pre-SET motif 779 907 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal8g2381 1070 ProSitePatterns Zinc finger C2H2 type domain signature. 493 514 IPR013087 -
Mal8g2381 1070 ProSitePatterns Zinc finger C2H2 type domain signature. 561 582 IPR013087 -
Mal8g2381 1070 MobiDBLite consensus disorder prediction 599 621 - -
Mal8g2381 1070 ProSitePatterns Zinc finger C2H2 type domain signature. 631 652 IPR013087 -
Mal8g2381 1070 ProSiteProfiles Pre-SET domain profile. 836 912 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal8g2381 1070 MobiDBLite consensus disorder prediction 599 620 - -
Mal8g2381 1070 SUPERFAMILY SET domain 766 1060 IPR046341 -
Mal8g2381 1070 ProSiteProfiles SET domain profile. 915 1047 IPR001214 GO:0005515
Mal8g2381 1070 ProSiteProfiles Post-SET domain profile. 1054 1070 IPR003616 -
Mal8g2381 1070 ProSitePatterns Zinc finger C2H2 type domain signature. 527 548 IPR013087 -
Mal8g2381 1070 SMART set_7 915 1053 IPR001214 GO:0005515
Mal8g2381 1070 ProSiteProfiles Zinc finger C2H2 type domain profile. 525 548 IPR013087 -
Mal8g2381 1070 ProSiteProfiles Zinc finger C2H2 type domain profile. 559 587 IPR013087 -
Mal8g2381 1070 SMART preset_2 775 899 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal8g2381 1070 Pfam Zinc finger C2H2-type, 3 repeats 527 653 IPR040689 -
Mal8g2381 1070 SMART c2h2final6 525 548 IPR013087 -
Mal8g2381 1070 SMART c2h2final6 491 514 IPR013087 -
Mal8g2381 1070 SMART c2h2final6 559 582 IPR013087 -
Mal8g2381 1070 SMART c2h2final6 629 652 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2381 Mal-Chr8 52308290 52319029 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2381 519 749 C2H2 Transcription Factor Family AT2G23740 39.623 1.10e-48 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal8g2381 Pre-SET 8.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2381 - - mtr:MTR_8g078490 976.467