Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal8g2381 | ATGGAAGAACTTATTTGTGTTGAAAATCGTCAAGATGACATATTGAAACTTGATGACAAACTCATTGAACTGAGCGACGATTCATTACTTGTAATGGAAGATTCATCTAGTGAAGACCAAATGAATTCATCTAGCTATCAAGAATTTGAAGAAATTAGTGTGGATAAGTTTCAAGGTGAAACATCACAAAACAGAACAGAAGTAGAATTGTCATTTTCTAAATTGTTGGAGGTGGATGAGCCTGTGGCTGTGTGGTTCAAGTGGAGAGGGAAGTGGCATGCAGGCATCAAATGTGAAAGGACTGATTGGCCATTATCAATTGTGAAAGTTAAACCAGCCGATGATGAGGAGAACAAATATTTTGTCATTTATTCTCCAGAAGCAAGGAATTATTCATGGGTTGATATGCTTCTCATTCAATCAATTGATGAGTTTCCTCAACCTATACCATATAAAACTCATCAAGAAGGATTGAAATTGCTCGCCGTTGAAATGCTTTACATTGTTGATCAGATTCATCTTAATGCTTTGATAGAAGATGCTCGTAATGTGACGGTTTGGAAGCAGTTTGCTACGGAAGCTTCTCATTGTCGTTGTTATTCAGATCTTGGAAGAATGCTTCAGAGGCTGCAAAATAACATAATGCAACACTATATCAAAGCTGATTGGAAACTGCATTCCTTTGAGTCTTGGCCTGAAAGATGTCAGAGTGCAAACACTGCTCAAATAGTAGAGCTACTTCAGGAGGAATTGTTTGATTCTATTTTGTGGAATGATGTCCACGCTCTCCGTGAAGCACCATCACAACAAAAAATAGGTGATGAAGGGAAAACATGGAGCGATGATGTAATGAAATGGTTTTGCACACTTCCTTCTGTTTCTGGTAGCAACAACACACAACAACATGCTTCTGGCTCTGATGCTTTGCACCGAGTAGGCCTTCAAGTTGGTAGCAAAAGGCCTAAACTTAAAGTTCGCTGCGCATATACACATTCTAGAGATGAAGATATTGTGGAGGTACCTGTGGAAACTGAGCTTCCTAGTCAATTGATCAGTCCAGTGAGTGAAATCGCAGTCGATCCTGCGATCATGTTCAACAATGAAACAATATCAAGGCATATCGATGAAATGGATATTCAAGCATTTGTAGAACCTCGTACTCAGGATGGTAGTGAGCATCGGCAATGTCAAGCATATATTGAAGCCAAGGGAAGGCAGTGTGTGAGAACGGCAATTGAAAAACGTGTTAAAGTTCTTACTCCAACTTGTGGAGGTACAACTACTGCTGGTACTAAATGTAAGCATAATTCCCTTCCCAACTTTGCATTTTGCAAGAAAAATCTGTGCAATGGTGACACGAATAGGATCTCAAATTTAAACCTTCGTACGTTGAAGAGGAAAGCTGAAGAAAGTTGTAGTGGTGAAATCCTTATGCTTTCCGGCAATGATCACAATGAAATTGAGACTGCTAATAAGTGCAAGATCTGCTTTGAAGAATTTTCAAATGACCGAACACTTGGCGATCATTGGATGGAAAATCATAAAAAGGAAGCACAATGGTTGTTCAGAGGTTATGCTTGTGCCATTTGTTTTGATTCCTTCAGTAACAAAAAACTATTGGAATCACATGTTCAGAAGAGACACAACGTTCCGTTTGTTGAACAATGCTTGCTCTTACTATGTATTCCTTGTGGTAGTCAATTCGGAAATATGGATGAATTATGGTTGCATGTTAAGTCAGTTCACCCTGCCGAATTTAAGCTCTCGAATGCTCCTGAGCAACTAACTTTGTCTATCAGTGATGATTCTCCGAAAATGATTGAGCAGGGAAATAAAGCTTCATTGGACAATGATAATTCCGAGAATCCAGGTGATTTGCGAAAATTAAGTTGCAGGTTTTGTGGTTTGAAATTTGATTTACTTCTTGATCTCGGTCGCCATCACCAAGCTGCTCATATGGAGCGCAATCTTTCTCGCAGGCGTTTGGCGAAAAAGCGAGTTCGTTACTATACTCAAATACTAAAATCAGGCAGCCTTGGCCAACATGAGAAGGGGGAAACATCCATGCAGCTGTCTCATGTAAACGAGACAACATGTACTGCTGAATTGGAAGAACCTCATTGCTTAGAAGCTGCTAGTATTTTGTCTTCTGATATTCACGAGACTCAACCCCGGCCAAACAATTTAGATATTTTATCAATCGCTTGCACTGCATGCTGCAAATTTAATCTTGAGGCCTCATTGAAGGAGAATGATGAGTCTCAACCCATCATCAATTCAAACCATATAAGATTAGGGTCATCACAAAAGACTCTAGTGTTATGTGATGACATAAGCTTTGGGATGGAATCAACTCCAATCATTTGTTTTGTAGATCAACAAATTCTTAACTCTCTTTTTGAGCAAGAGCAACATATAAGAATTCCTAGACCTTGGGAGAGCTTTACATATGTGATAAAATCGATGATTGATTTCTCACCTAGTCTTGCTTATGAGGGTCTGCAATTGAAATGTTATTGCTCATCTTCTACCTGTTGTCGTGAAACTTGCGATCACGTATATCTTTTTGATAATGATTATGATACTGCAAAAGACATATACGGGGAATCAATGTGCGGCAAGTTTCCATATGACAACAATGGTCGAATCATATTGGAGGAAGGTTATCTTGTATATGAGTGCAATGATAATTGCAAATGTGATAAAACCTGCCCAAACAGGATATTGCAAAATGGAATTCGTGTTAAGTTGGAAGTCTTTAAAACTGAGAAAAAGGGATGGGGTGTAAGGGCTAGCGAGGCTATTTCGCGCGGCAGATTTGTGTGTGAGTACATTGGAGAGGTTTTAGATGAGCAAGAGGCACATAACAGACGCGACAGATATGGAAAAGAACATTGCAATTATTTCTACAATGTTGATGCTTGTGTTAATGATATGAGCCGATTAGTCGAAAGACATGCCCGATATGTCATCGACTCTACTAGATATGGAAATGTGTCCAGATTCATCAACAACAGTTGTTCACCCAATCTTGTGAATTACCAAGTTCTTGTAGAGAGCATGGATTGTAAACGTTCACATATCGGTTTTTATGCAAGTCGTGATATTGCTTTGGGTGAAGAATTAACTTATAATTATCACTATGAGCTTGTTGATGGAGAAGGATCTCCTTGTCTTTGTGGATCTTCGAAGTGTCGGGGTCGCTTGTACTAG | 3213 | 0.3918 | MEELICVENRQDDILKLDDKLIELSDDSLLVMEDSSSEDQMNSSSYQEFEEISVDKFQGETSQNRTEVELSFSKLLEVDEPVAVWFKWRGKWHAGIKCERTDWPLSIVKVKPADDEENKYFVIYSPEARNYSWVDMLLIQSIDEFPQPIPYKTHQEGLKLLAVEMLYIVDQIHLNALIEDARNVTVWKQFATEASHCRCYSDLGRMLQRLQNNIMQHYIKADWKLHSFESWPERCQSANTAQIVELLQEELFDSILWNDVHALREAPSQQKIGDEGKTWSDDVMKWFCTLPSVSGSNNTQQHASGSDALHRVGLQVGSKRPKLKVRCAYTHSRDEDIVEVPVETELPSQLISPVSEIAVDPAIMFNNETISRHIDEMDIQAFVEPRTQDGSEHRQCQAYIEAKGRQCVRTAIEKRVKVLTPTCGGTTTAGTKCKHNSLPNFAFCKKNLCNGDTNRISNLNLRTLKRKAEESCSGEILMLSGNDHNEIETANKCKICFEEFSNDRTLGDHWMENHKKEAQWLFRGYACAICFDSFSNKKLLESHVQKRHNVPFVEQCLLLLCIPCGSQFGNMDELWLHVKSVHPAEFKLSNAPEQLTLSISDDSPKMIEQGNKASLDNDNSENPGDLRKLSCRFCGLKFDLLLDLGRHHQAAHMERNLSRRRLAKKRVRYYTQILKSGSLGQHEKGETSMQLSHVNETTCTAELEEPHCLEAASILSSDIHETQPRPNNLDILSIACTACCKFNLEASLKENDESQPIINSNHIRLGSSQKTLVLCDDISFGMESTPIICFVDQQILNSLFEQEQHIRIPRPWESFTYVIKSMIDFSPSLAYEGLQLKCYCSSSTCCRETCDHVYLFDNDYDTAKDIYGESMCGKFPYDNNGRIILEEGYLVYECNDNCKCDKTCPNRILQNGIRVKLEVFKTEKKGWGVRASEAISRGRFVCEYIGEVLDEQEAHNRRDRYGKEHCNYFYNVDACVNDMSRLVERHARYVIDSTRYGNVSRFINNSCSPNLVNYQVLVESMDCKRSHIGFYASRDIALGEELTYNYHYELVDGEGSPCLCGSSKCRGRLY* | 1071 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal8g2381 | 1070 | Gene3D | Classic Zinc Finger | 491 | 549 | - | - | |
Mal8g2381 | 1070 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 | 486 | 1070 | - | - | |
Mal8g2381 | 1070 | PANTHER | SET DOMAIN PROTEIN | 2 | 476 | - | - | |
Mal8g2381 | 1070 | Gene3D | SET domain | 767 | 1070 | IPR046341 | - | |
Mal8g2381 | 1070 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 | 2 | 476 | - | - | |
Mal8g2381 | 1070 | Pfam | SET domain | 926 | 1046 | IPR001214 | GO:0005515 | |
Mal8g2381 | 1070 | PANTHER | SET DOMAIN PROTEIN | 486 | 1070 | - | - | |
Mal8g2381 | 1070 | Pfam | Pre-SET motif | 779 | 907 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Mal8g2381 | 1070 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 493 | 514 | IPR013087 | - | |
Mal8g2381 | 1070 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 561 | 582 | IPR013087 | - | |
Mal8g2381 | 1070 | MobiDBLite | consensus disorder prediction | 599 | 621 | - | - | |
Mal8g2381 | 1070 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 631 | 652 | IPR013087 | - | |
Mal8g2381 | 1070 | ProSiteProfiles | Pre-SET domain profile. | 836 | 912 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Mal8g2381 | 1070 | MobiDBLite | consensus disorder prediction | 599 | 620 | - | - | |
Mal8g2381 | 1070 | SUPERFAMILY | SET domain | 766 | 1060 | IPR046341 | - | |
Mal8g2381 | 1070 | ProSiteProfiles | SET domain profile. | 915 | 1047 | IPR001214 | GO:0005515 | |
Mal8g2381 | 1070 | ProSiteProfiles | Post-SET domain profile. | 1054 | 1070 | IPR003616 | - | |
Mal8g2381 | 1070 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 527 | 548 | IPR013087 | - | |
Mal8g2381 | 1070 | SMART | set_7 | 915 | 1053 | IPR001214 | GO:0005515 | |
Mal8g2381 | 1070 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 525 | 548 | IPR013087 | - | |
Mal8g2381 | 1070 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 559 | 587 | IPR013087 | - | |
Mal8g2381 | 1070 | SMART | preset_2 | 775 | 899 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Mal8g2381 | 1070 | Pfam | Zinc finger C2H2-type, 3 repeats | 527 | 653 | IPR040689 | - | |
Mal8g2381 | 1070 | SMART | c2h2final6 | 525 | 548 | IPR013087 | - | |
Mal8g2381 | 1070 | SMART | c2h2final6 | 491 | 514 | IPR013087 | - | |
Mal8g2381 | 1070 | SMART | c2h2final6 | 559 | 582 | IPR013087 | - | |
Mal8g2381 | 1070 | SMART | c2h2final6 | 629 | 652 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal8g2381 | Mal-Chr8 | 52308290 | 52319029 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal8g2381 | 519 | 749 | C2H2 Transcription Factor Family | AT2G23740 | 39.623 | 1.10e-48 | 187 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mal8g2381 | Pre-SET | 8.8e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal8g2381 | - | - | mtr:MTR_8g078490 | 976.467 |