Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2363 ATGGCTAGGATCCAAAGAAAACTCTTCCCAACAGAAACTACCACAAACCAAACCTTTGATTGTTATGGTTTTTGTGACCCTTCATGTCCTTCAAATTGTTACACTAATACAAATTACTATTTCACACCCCCACCACTAGAACACACAACGCAAGTTAACCACGTTTCCTCTTACTTCATAATCCTCATTTCACTATTCTCATTGATTTTTATCATCATTGGTTTCTATGTGGTCAAAGTGAAATGCTATAATAAAATGTGTGGTTGGAGAATCAATAACTCGGTTCGCGCACAAACCGAGAATTCTGAAGACTTTCTCAATGAAAACGAGTTTGATCACGATCATAATCGTGATCACAATCGCGATCACCCCGTGTGGCTCATTGCTACAGTTGGTTTGCAACAATCGATTATAAATTCAATTACTGTTTGCAAGTATAGAAAAAATGAAGGGTTAATTGAAGGAACGGAATGTTCGGTTTGTTTGAATGAGTTTCATGAAGATGAAACGTTAAGATTATTGCCAAAGTGTAGCCATGCTTTTCACATTTCTTGTATTGACACTTGGTTGAGATCTCATACTAATTGTCCTCTTTGTCGAGCCGGTATTGTTTCCAACAATGTTACTCCTGAAGTAACATTGTCGAATTCGGAACAAGAAAATAACAACTTGGAAAGAAATCAAGAGACTCATTTGGAGAATCCTAGGAATGATCAAGAACATGTGTTAAGCAACAATATTGTTATCAATGTGGCATTTGAAAACAGGGCTGAAACAACAGGGGAATCAAGTGATGAATCAAATTACAAGGAGCAAATAATCGATGATCCAACGGTTATGAATGATGAGATGCAAATTGAGATGGGTTCTGTTTCAACTGAACCTGGAAGCTATAATCAAATTATTGGTCATCTAGGGGAATATGAGAAAGATGTGCACAATGTTAGTCTTTGGAAGATTATTACTCAAAAAAATAGTAAATTGACGCGTCGTTCTCCAATTGAAGAGCGTTTGCATGTAAGGCCGGTAGCTATGAAGAAGTTTTTCCGTCTACACCAAAGAAAGGGTTTTAAAAAAAGATACGCGACTACAATTTGGACCGCAACATCATAG 1113 0.3693 MARIQRKLFPTETTTNQTFDCYGFCDPSCPSNCYTNTNYYFTPPPLEHTTQVNHVSSYFIILISLFSLIFIIIGFYVVKVKCYNKMCGWRINNSVRAQTENSEDFLNENEFDHDHNRDHNRDHPVWLIATVGLQQSIINSITVCKYRKNEGLIEGTECSVCLNEFHEDETLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAGIVSNNVTPEVTLSNSEQENNNLERNQETHLENPRNDQEHVLSNNIVINVAFENRAETTGESSDESNYKEQIIDDPTVMNDEMQIEMGSVSTEPGSYNQIIGHLGEYEKDVHNVSLWKIITQKNSKLTRRSPIEERLHVRPVAMKKFFRLHQRKGFKKRYATTIWTATS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2363 370 MobiDBLite consensus disorder prediction 213 239 - -
Mal8g2363 370 SUPERFAMILY RING/U-box 148 206 - -
Mal8g2363 370 SMART ring_2 158 199 IPR001841 -
Mal8g2363 370 CDD RING-H2_EL5_like 157 200 - -
Mal8g2363 370 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 208 IPR013083 -
Mal8g2363 370 SMART FANCL_C_2 154 207 - -
Mal8g2363 370 Coils Coil 214 234 - -
Mal8g2363 370 MobiDBLite consensus disorder prediction 224 238 - -
Mal8g2363 370 Pfam Ring finger domain 157 200 IPR001841 -
Mal8g2363 370 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 361 - -
Mal8g2363 370 ProSiteProfiles Zinc finger RING-type profile. 158 200 IPR001841 -
Mal8g2363 370 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 361 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2363 Mal-Chr8 51901635 51902747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2363 1 273 C3H Transcription Factor Family AT1G72220 41.935 2.51e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2363 - - mtr:MTR_5g064890 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2363 8 51901635 51902747 Mal8g2363 8 51901635 51902747 ECH