Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2356 ATGGACACTAATGTTGCTAGTTCGTCTAACAAGAGTACAAGGACTATTGTTCCTCCAAATACTTGTTCCTTACAAGAGTCTGAAGCTATTGATGTTGGGAATGAAAATGCAGAAAAAAGCAATGAAAATACTCGACAAGATATTTTAGATAATGGAGAAGAATTGAATATCCAGCCCTACTGTGGTATGGAATTCGAGTCTATTGAAATGGTTAAAGAATTTTATACTTCATTTGCAAAGAATAGAGGTTTTGGAGTACTTGTTCGTTCAACTAAACCAAAAAGAGCAGTATTTGTGTGTTGCAATGAAGGTCATCACAAAGTCAAAGAGTCTACGAATGAAGAAAATCAAGATAACATTCGCCGCACTAAAAGAAAGTGCTCAACTATTCGAACTGGTTGTCTAGCTTTACTTGATATGATTAAATATTTCAAAGATGATCATAATCATGCTATGGTTACTCCTAGAAAAGTGTCTTATATGAGATGTCATAAAAAGATGCCTGATTCTGCAAAAAGCCTTGTTGAAAAGTTTGAGGAAGAAGGAATACCAACTGGAAAAGTTGCTACTATTTTCAATAGTGGTGACCTAACATTCTCTAATAGAGATTGTTGGAATCATATGAATCAAGTTCGGAAAAAGAAACTGGATGTTGGAGATGCTCAAGCTGTTTTTAATTACTGTCAAAGAAAGCAAATTGAAAATTCCAACTTTTTCTATTCAATCCAATGTGATGATGATTCTCGAATTCTAAACTTTTTTTGGATAGATGCTAGATCAAGATTGGCTTACCAACACTTTGGAGATGTCATAACTTTTGACACCACTTACAAAACCAACAAGTATAGTATGCCATTTGCCCCTTTTACCGGATTGAATAATCACGGCCAATCAATTTTATTTGGTTGTGCTTTATTACAAAATGAGTCAGAGAGTTCTTTCACATGGCTATTTAAAATTTGGCTTGATGCAATGAACGGAAAAAAATCTATATCTATCATAACTGATCAAGATTTAGCTATTGGAGCTGCTGTGGCAAAAGTATTTCCAGAAACTCGACATCGTCTTTTCTTATGGCACATCAGAAAAAAGTTTCCTGAAAAGTTAGCTCACATATATCACAAAAAATCTATATTCAAAGGTGAACTAAAAAGTTGCATTCGAGATTCTCCTAGTATTCAAAGTTTTGAAGAAGAGTGGAACCGCTTGATAGTTGAGTACAAGTTGGAGGAAAATGAATGGCTTCAAGGGTTATACAAAATTAGAGAATCATGGATACCAATTTATAATAGAAGCACATTTTTTGCTGGGATGAATACTACTCAAAGAAGTGAGAGTATTAATGCTTTTTTTGATTCTTTTGTAGATGCAACAACAACATTGCAAGAATTTGTGGTAAAGTTTGAGAAAGCAGTTGAAAGCCGATTGGAGGTAGAAAGAAGGGAAGATTATGAATCCAGACATAAAAAGCGCATTTTGACTACTGGATCAAAACTTGAGGAGCATGCTTCATTTGTTTATACAAGAAATATTTTCTGTAAGTTTCAGGAGGAGCTTGCAAAGATCAACAATTTTACTAAAAAGAAGATTCGAAGAGAAGGACCAAGATATGAGTATGAAGTGTCTAATGGCTACAACCCTAAAGATACCTTCATTGTTGATATAGATTTAGACTCAAAAATTGCTAAATGTGGTTGTCAACTATATGAATTCATGGGCTTGTCATGTAGACATATACTAATGATTTTTCAAACAAAAGGTATTGTGCAAATCCCTGATCATTTCATTCTGAAACGTTGGACCAAGGATGCTAACAAAGGAATTGAGTCTAGTGATACTAAAAGTGGTTTTGATACTCATTCTAATACATCAAAGATTTTAAGAAGGGTGCATGCACAACAAGAAGCAAGTGCATTAGTTGATCTTGCTGAAGAATCAGAGGATTTATATAAGTTCATTATTCTGGAATTCGGTAACCTTCGTGTGTCGGCTATGAAAATGAAAGCAAATTTATCAATTGGTGATGGAGTAACTCATTTGGAGTCTAGCCAGAATAATATGAATGATATTTTCATACATGAGCAAGGGAGCGAAACTCCACAAGTAATTATTGAAGACCCACAACAATCACAACCAAAAGGGCGGAAAAAAGATGGGGATAAAACGACTCAAAATATTAGATTTAAGAGTGGGCTTGAAGAATCTGTTAACAAATCGTTGGTCAAAAGGAAAGCATGTCATGAGTGCGGGGAATCTGGTCATAATAGTAGAACTTGCAAAAAAAGAAATCTTGAAGACTAA 2301 0.3438 MDTNVASSSNKSTRTIVPPNTCSLQESEAIDVGNENAEKSNENTRQDILDNGEELNIQPYCGMEFESIEMVKEFYTSFAKNRGFGVLVRSTKPKRAVFVCCNEGHHKVKESTNEENQDNIRRTKRKCSTIRTGCLALLDMIKYFKDDHNHAMVTPRKVSYMRCHKKMPDSAKSLVEKFEEEGIPTGKVATIFNSGDLTFSNRDCWNHMNQVRKKKLDVGDAQAVFNYCQRKQIENSNFFYSIQCDDDSRILNFFWIDARSRLAYQHFGDVITFDTTYKTNKYSMPFAPFTGLNNHGQSILFGCALLQNESESSFTWLFKIWLDAMNGKKSISIITDQDLAIGAAVAKVFPETRHRLFLWHIRKKFPEKLAHIYHKKSIFKGELKSCIRDSPSIQSFEEEWNRLIVEYKLEENEWLQGLYKIRESWIPIYNRSTFFAGMNTTQRSESINAFFDSFVDATTTLQEFVVKFEKAVESRLEVERREDYESRHKKRILTTGSKLEEHASFVYTRNIFCKFQEELAKINNFTKKKIRREGPRYEYEVSNGYNPKDTFIVDIDLDSKIAKCGCQLYEFMGLSCRHILMIFQTKGIVQIPDHFILKRWTKDANKGIESSDTKSGFDTHSNTSKILRRVHAQQEASALVDLAEESEDLYKFIILEFGNLRVSAMKMKANLSIGDGVTHLESSQNNMNDIFIHEQGSETPQVIIEDPQQSQPKGRKKDGDKTTQNIRFKSGLEESVNKSLVKRKACHECGESGHNSRTCKKRNLED* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2356 766 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Mal8g2356 766 MobiDBLite consensus disorder prediction 710 724 - -
Mal8g2356 766 ProSiteProfiles Zinc finger CCHC-type profile. 746 761 IPR001878 GO:0003676|GO:0008270
Mal8g2356 766 Pfam MULE transposase domain 270 364 IPR018289 -
Mal8g2356 766 SMART 26again6 562 589 IPR006564 GO:0008270
Mal8g2356 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 48 687 - -
Mal8g2356 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 687 IPR031052 GO:0006355
Mal8g2356 766 MobiDBLite consensus disorder prediction 705 729 - -
Mal8g2356 766 Pfam SWIM zinc finger 553 586 IPR007527 GO:0008270
Mal8g2356 766 MobiDBLite consensus disorder prediction 746 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2356 Mal-Chr8 51504820 51507150 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal8g2356 MULE 2.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2356 - - qlo:115970754 827.78