Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2315 ATGGAAAATAATGTTGACGAGAATATGCAGATGGATGAATCTGTTGCATCTGTGGAGGGACTAGAAGACTTGTCAACTGGGGTAAGTGATGAAGCAACATGTGAGACCGTTGACGATGATGCCGTTAGTGTTGAGGCTGGGGAAGGTAGTGAAGAAATTATAAATATTGATAGAAAGGAGGATATTCTTAGCATGGACTTGAAGGGATTAAGTCCCCATGAGACAAGGAAATTTCAGTTTTCAAGTCTGGATATGGCTTATGAGTTCTATAACTGGTATGATAGAATGAATGGGTTTGCAGTCCGCAAGAGCAAGATACTTCGAAGCAAGACAGGGGAAATATTACAGCGAACCTTTGTCTGCCACAGACAAGGGTTTAGGGAGGATAGAGGCTTAACAATAGAAAACCGTAAGCGTGAGCGTAAACCTGAGACTCGGTGTGGATGTGAAGCTAAATTTCGAGTGCATATAGATATGTTCTCACAGCGTTGGTTGATAACTGTTTTTACCGATCAACACAACCATGAGCTTTTAGATGAAAAGTACCATGGAATGCTTGCTGCACATCGAAAAATGAAAGACTCAGATATAATGCAGATGAACGACATGTTGAAGGTTGGGATAGGGCCGTCTCGATTCTATAGTTCTTTGGCAAACCAATCAGGAGGGTATGAAAAGATTGGGTTTCGTAAGAAAGATATATATAATCAAATAGGAAAGCAACGCCTTTTGAAACATTTTGATGGTAAAAATGCTTTACAGCATCTTCATGGGCTGGCATCAGATGACCCGATGATGTTTTATCGCCACACCGTTGACGGAGAAGGTAGGCTTGAACACCTGTTTTGGTGTGATGGTATAAGCCAAATGGATTTCAAAGTTTATGGTGATGTGTTGGCATTTGATGCAACATATGGAACGAACAAATATCACTGTCCCTTAGTAGTGTTTTCTGGCGTTAATAACCACAATCATAATGTTATATTTGGTGGTGCTATTGTTGCAAATGAAAAAGAAGAAACATATGTGTGGGTTCTTGAACAATTCTTGGACGCAATGTCAGGCAAGTATCCTGTATCTGTAATTACTGATGGCGATCTTGCAATGAAGAATGCTATAAAAAGGGTATTTCCAAATGCTTATCATAGATTGTGTGCTTGGCATCTAATTCGAAATGCAACGTCTAACGTTGGAGTTCCTGAATTTGTGGGTCGGTTTAGGAAATGCATGTTGGGTGATTATGACCTGGGTGAGTTTCGGCGCAAGTGGACTGAAATGGTTGACACATTTGAGTTGCATGACAACAAGTGGGTTAAAGAACTCTATGCAAAGAGAAAGATGTGGGCCACAGCACATATACGCGGCAATTTTTTTGCTGGGTTCAGAACTACCTCCCGATGTGAGGGATTACATTCAGAAATGGGGAAGTTTCTTCACTCACGATATAATTTGACTGATTTTTTGCTACATTTTCATCGATGCCTTAATTACATGCGTTATAAGGAGGTTGAAGCTGACCTTGCTTCTAATCACGGTGATCTTGTACTACAAACAAGATTTCAAAGCATGGAGCGTTATGCTGGAAAGTTATTTACTCGGGAAATATTCTTTATATTTCGTGATATTCTTGAACGGTCTGCAGAGATGGTCGTGACAGCATGCAATCAAACTTACACATGCTTCATATACACAATTTGTAAGTACCAGGCATCTAAACGGGAGTGGAACGTCTCATTTTGTCCAGATGATGATGTGTTCAAGTGTTCTTGCAAGAAGATGGAGTCATTTGGCCTCCCATGCGAGCATATTATTGCACTTTTGGTTTTTTTAGATGTTGCTGAATTGCCGAAGACTCTGGTGGCAGCTAGGTGGACAAAGAATGCGAAGGAAGCAATATGTAGCACAAATAAGCATCTTCCAAAATATTGGGATTCGCACAAGACGTCTAGATATTCTGCTCTTATGTTACGATATATGCGTTTGAGCAAATTAGCTAGTGAGACTGGTGATGATTTCAATGATCATATGGAGCAAGTTGCTGCTGATATTCATAAGATGGAAACAAAGATGGGCTTACATGATGGTGGAGCTTTAGATTCAAGTCAAAGTGACCATGAGATATTGAGGGATCCTGCTCTAGTTAGAAGTAAAGGATGCGCTGCTGTAGCTTCGTCGCATACTCAGAAGAAAAGGAAGCGCACTCGGTGTTCTGCTTGCAATAAAGTTGGGCATAATAAACAAACATGTCCAATACGTCGACATCATTCTAACACGACACATTCGCCACATGAAGATTGTCACAACAATGACTTCAGTGACAACTCTGTAAGCAAGTTCTATAATTTTTTATGTAATGATATTTTTTTATATATATTACCCATTGTTTTAATTATCTGTTAA 2400 0.3979 MENNVDENMQMDESVASVEGLEDLSTGVSDEATCETVDDDAVSVEAGEGSEEIINIDRKEDILSMDLKGLSPHETRKFQFSSLDMAYEFYNWYDRMNGFAVRKSKILRSKTGEILQRTFVCHRQGFREDRGLTIENRKRERKPETRCGCEAKFRVHIDMFSQRWLITVFTDQHNHELLDEKYHGMLAAHRKMKDSDIMQMNDMLKVGIGPSRFYSSLANQSGGYEKIGFRKKDIYNQIGKQRLLKHFDGKNALQHLHGLASDDPMMFYRHTVDGEGRLEHLFWCDGISQMDFKVYGDVLAFDATYGTNKYHCPLVVFSGVNNHNHNVIFGGAIVANEKEETYVWVLEQFLDAMSGKYPVSVITDGDLAMKNAIKRVFPNAYHRLCAWHLIRNATSNVGVPEFVGRFRKCMLGDYDLGEFRRKWTEMVDTFELHDNKWVKELYAKRKMWATAHIRGNFFAGFRTTSRCEGLHSEMGKFLHSRYNLTDFLLHFHRCLNYMRYKEVEADLASNHGDLVLQTRFQSMERYAGKLFTREIFFIFRDILERSAEMVVTACNQTYTCFIYTICKYQASKREWNVSFCPDDDVFKCSCKKMESFGLPCEHIIALLVFLDVAELPKTLVAARWTKNAKEAICSTNKHLPKYWDSHKTSRYSALMLRYMRLSKLASETGDDFNDHMEQVAADIHKMETKMGLHDGGALDSSQSDHEILRDPALVRSKGCAAVASSHTQKKRKRTRCSACNKVGHNKQTCPIRRHHSNTTHSPHEDCHNNDFSDNSVSKFYNFLCNDIFLYILPIVLIIC* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2315 799 Pfam FAR1 DNA-binding domain 88 178 IPR004330 -
Mal8g2315 799 PANTHER OS02G0262500 PROTEIN 79 740 - -
Mal8g2315 799 Pfam MULE transposase domain 298 392 IPR018289 -
Mal8g2315 799 ProSiteProfiles Zinc finger SWIM-type profile. 575 611 IPR007527 GO:0008270
Mal8g2315 799 Pfam SWIM zinc finger 588 607 IPR007527 GO:0008270
Mal8g2315 799 SMART 26again6 586 613 IPR006564 GO:0008270
Mal8g2315 799 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 79 740 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2315 Mal-Chr8 49943248 49945726 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal8g2315 MULE 4.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2315 - - ccaj:109791994 756.903