Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2299 ATGGTGGAGAAGGGTGCAGCAGGTAGAAAGGAAGAGGTTGTTACCAGAGAGTACACCATCAATCTCCACAAGCCCATCAAGGAGATCAGAAAGTTTGCTCAAAAAGCCATGGGCACTAACGATGTTAGAGTCGATGTCAAGATGAACAAGGCTATCTGGAGTCAGGGAATTAGAAGTGTTCCCAGGAGGATCAGGGTGCGCATTGCTCGCAAGAGGAACGACGATGAAGATGCCAAGGAAGAACTATACTCCCTTGTCACAGTCGTTGAAATTCCTAAGGAAGAGCTAAAAGGTTTGGGCACCAAGGTCATCGATGATGAAGATTGA 327 0.4679 MVEKGAAGRKEEVVTREYTINLHKPIKEIRKFAQKAMGTNDVRVDVKMNKAIWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLGTKVIDDED* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2299 108 CDD Ribosomal_L31e 10 80 IPR000054 GO:0003735|GO:0005840|GO:0006412
Mal8g2299 108 SUPERFAMILY Ribosomal protein L31e 12 80 IPR023621 -
Mal8g2299 108 Pfam Ribosomal protein L31e 12 80 IPR000054 GO:0003735|GO:0005840|GO:0006412
Mal8g2299 108 PANTHER 60S RIBOSOMAL PROTEIN L31-2-RELATED 1 108 - -
Mal8g2299 108 SMART Ribosomal_L31e_2 11 81 IPR000054 GO:0003735|GO:0005840|GO:0006412
Mal8g2299 108 Gene3D - 9 108 IPR023621 -
Mal8g2299 108 PANTHER 60S RIBOSOMAL PROTEIN L31 1 108 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2299 Mal-Chr8 49581925 49582290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2299 8 108 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 71.930 1.33e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2299 K02910 - gmx:100499742 174.096