Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2297 ATGGAATTTGAAGAGCAAGAGGAACACGAAGAGGAGATGGAGATTCCAGAAACAACAACGCCGGTGCCAACGAGTTACGACTCACTCGGTAACTCAGCTTCACGTTCAAAACTCACCGTCGTAGTTGACGGCCGGAAAGGTAACGGTAACGGTGGTTTTGCTGCGGTGAGATACCGAGAATGTCAGAAGAATCACGCCGTCAGCTTCGGTGGTCACGCTGTTGATGGTTGCTGTGAGTTTATCGCCGCCGGTGAAGAAGGTACACTTGAAGCTGTGATTTGCGCCGCTTGTAACTGTCACCGGAACTTTCACCGCAAAGAGATCGACGGTGAGACGGTTAGTTCATGTAACCGTCCACAACCACCACCGCCGCCGCCACAATATCATCATCATCATCATAACAATCAATTCTCACCTTACTACCACCGTGCTCCTCCTTCCACGGCCGGTTACCTCCACCACCATCACCTTGCAACTCCGGTGGCGCATCACAGACCGTTGGCTCTCCCTGCCGCTGGTTCTGGTGGTGGAATGAGTAGAGAAGATGATGATATGTCAAACCCTAGCAGCAGCGGCGGTGGAGGTGGTGGTGGAGGATCAAAGAAGAGATTTAGAACAAAATTCACTCAAGAACAGAAAGAGAAGCTCTTGGCTTTTGCTGAAGAACATGGTTGGAGAATTCAGAAACAAGATGAAGCTGCTATAGAACAGTTTTGTGCTGAGAATTGTGTGAAGAGAAATGTTCTTAAAGTTTGGATGCACAATAACAAGAACACTCTTGGTAAGAAACCCTAA 795 0.4868 MEFEEQEEHEEEMEIPETTTPVPTSYDSLGNSASRSKLTVVVDGRKGNGNGGFAAVRYRECQKNHAVSFGGHAVDGCCEFIAAGEEGTLEAVICAACNCHRNFHRKEIDGETVSSCNRPQPPPPPPQYHHHHHNNQFSPYYHRAPPSTAGYLHHHHLATPVAHHRPLALPAAGSGGGMSREDDDMSNPSSSGGGGGGGGSKKRFRTKFTQEQKEKLLAFAEEHGWRIQKQDEAAIEQFCAENCVKRNVLKVWMHNNKNTLGKKP* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2297 264 MobiDBLite consensus disorder prediction 18 33 - -
Mal8g2297 264 MobiDBLite consensus disorder prediction 167 203 - -
Mal8g2297 264 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 58 107 IPR006456 -
Mal8g2297 264 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 201 258 IPR006455 -
Mal8g2297 264 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 36 263 - -
Mal8g2297 264 Pfam ZF-HD protein dimerisation region 56 108 IPR006456 -
Mal8g2297 264 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 36 263 - -
Mal8g2297 264 SUPERFAMILY Homeodomain-like 188 262 IPR009057 -
Mal8g2297 264 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 57 108 IPR006456 -
Mal8g2297 264 MobiDBLite consensus disorder prediction 1 33 - -
Mal8g2297 264 MobiDBLite consensus disorder prediction 112 151 - -
Mal8g2297 264 Gene3D - 186 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2297 Mal-Chr8 49562247 49563041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2297 1 260 ZF-HD Transcription Factor Family AT4G24660 48.462 2.99e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mal8g2297 ZF-HD_dimer 9.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2297 - - gmx:100776421 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2297 8 49562247 49563041 Mal2g1240 2 14823272 14824455 PCT