Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2282 ATGATGTGGGAATGGGAAGAAGAAGAAGAACAACAACATGAACACCACCACCACCAACAACAATTTCACGACAACAACACTTCCCAGAAACCCGACCAAATTCCCGACCCAAATTCCTATCTCAATTTCGATTTCTTCTCATCTCTCTCTAAACCCAAGGACTATTACAAGATATTAGAAGTGGATTACGATGCAAACGAGGATACTATTCGCTCTAATTACATTCGTCTTGCTTTGAAATGGCACCCGGATAAACAGAAAGACCAAGATTCTGCCACGTCACGCTTTCAAGACATAAACGAGGCTTATCAGGTTTTGAGTGATCCAGACAAAAGGAGAGAGTATGACATAAACGGGATGCGTTACGGATATGATTACAATATCATTGATTATCTTAACCGCTACAAAGGTCTCATATTGACTTGCAATGGCCTCGGCCTAAAGCATTCAATATGGTAA 459 0.4074 MMWEWEEEEEQQHEHHHHQQQFHDNNTSQKPDQIPDPNSYLNFDFFSSLSKPKDYYKILEVDYDANEDTIRSNYIRLALKWHPDKQKDQDSATSRFQDINEAYQVLSDPDKRREYDINGMRYGYDYNIIDYLNRYKGLILTCNGLGLKHSIW* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2282 152 MobiDBLite consensus disorder prediction 1 35 - -
Mal8g2282 152 CDD DnaJ 54 108 IPR001623 -
Mal8g2282 152 SUPERFAMILY Chaperone J-domain 50 138 IPR036869 -
Mal8g2282 152 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 9 152 - -
Mal8g2282 152 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Mal8g2282 152 PRINTS DnaJ domain signature 91 111 IPR001623 -
Mal8g2282 152 PRINTS DnaJ domain signature 56 74 IPR001623 -
Mal8g2282 152 PRINTS DnaJ domain signature 74 89 IPR001623 -
Mal8g2282 152 Pfam DnaJ domain 54 116 IPR001623 -
Mal8g2282 152 Gene3D DnaJ domain 46 128 IPR036869 -
Mal8g2282 152 MobiDBLite consensus disorder prediction 1 23 - -
Mal8g2282 152 ProSiteProfiles dnaJ domain profile. 54 119 IPR001623 -
Mal8g2282 152 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 9 152 - -
Mal8g2282 152 SMART dnaj_3 53 111 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2282 Mal-Chr8 49171444 49175400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2282 47 116 C2H2 Transcription Factor Family AT1G74250 42.667 4.32e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2282 - - gmx:100804409 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2282 8 49171444 49175400 Mal8g2282 8 49171444 49175400 ECH