Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2270 ATGTTCTCAAACTTTCAACAACAACAACACCGCAACCTATTTCAACCCTCACGTGAATGCCAAACCTCAGAAGAAGATGAAACCCGAAGCAGCGGTGGGCCCACTGCCCAGAAACCTTCCTCCGACGGTGCCACAATTGAAATTGGTCGTAGGCCCAGAGGCCGTCCACCTGGGTCCAAAAACAAACCCAAAGCCCAATCCCAAATCATAATCAATCACTCCTCCGAGCCCGCTATGAGCCCACACATTCTTGAAATCCCTGCTGGAAGCGACGTCGTCGAAGCAATAGCACGGTTCAGTAACAGAAGAAAAACCGGTTTATGCGTATTAACCGGTTCAGGCACCGTTGCAAACGTTACACTCCGTCAACCTTCTGGTCCTCCTGGCACCATCGTTACTTTTCATGGTCGTTTCGACATTCTCTCAATCTCCGCCACGTTCTTCTCTCCATCGGAATCCTCACCGCCGATGAATAAAGAATTCTCCATCTCCCTCGCCGGACCTCAGGGTCAGATAATCGGAGGGTTTGTTGTTGGACAGTTGCTTGCCGCCGGTACGGTGTTTGTGATTGCTGCTTCGTTTAACAATCCGTCTTATCATAGGTTGCCTTTGGAAGAGGATGCGAGGGATAAGTCGGTTTCCGGCGGTGGTGATGAGAAGTCTCCGCCGGCGTTCTCTGGTGGGGAGTCGTGTATGTATAGCGCTCAACTTCCTTCTGATGTGATTTGGGCTCCAACTGCAAGAACAAACTTCTGA 756 0.5066 MFSNFQQQQHRNLFQPSRECQTSEEDETRSSGGPTAQKPSSDGATIEIGRRPRGRPPGSKNKPKAQSQIIINHSSEPAMSPHILEIPAGSDVVEAIARFSNRRKTGLCVLTGSGTVANVTLRQPSGPPGTIVTFHGRFDILSISATFFSPSESSPPMNKEFSISLAGPQGQIIGGFVVGQLLAAGTVFVIAASFNNPSYHRLPLEEDARDKSVSGGGDEKSPPAFSGGESCMYSAQLPSDVIWAPTARTNF* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2270 251 CDD DUF296 81 194 IPR005175 -
Mal8g2270 251 MobiDBLite consensus disorder prediction 1 19 - -
Mal8g2270 251 MobiDBLite consensus disorder prediction 1 67 - -
Mal8g2270 251 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 206 - -
Mal8g2270 251 Gene3D - 80 212 - -
Mal8g2270 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 248 IPR014476 GO:0003680
Mal8g2270 251 MobiDBLite consensus disorder prediction 27 42 - -
Mal8g2270 251 ProSiteProfiles PPC domain profile profile. 76 215 IPR005175 -
Mal8g2270 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 6 248 - -
Mal8g2270 251 PIRSF ESCAROLA 1 242 IPR014476 GO:0003680
Mal8g2270 251 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 196 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2270 Mal-Chr8 48982336 48983091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2270 39 248 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 58.952 2.97e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2270 - - cam:101500910 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2270 8 48982336 48983091 Mal8g2270 8 48982336 48983091 ECH
Mal8g2270 8 48982336 48983091 Mal2g1626 2 19621279 19622668 PCT