Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2261 ATGCTTCCTCCTTTAAGGAGATTCTATGGGTTTGAGAGCTGGCTAGATAAAGACTCAGAGAAAATCAACTGTGAGAAATCAAAATCAGAGAGAAAATCAAAAGAAGCATGCAAGAGTCACAGGGAAGCTGAAAGAAGACGTAGACAGCGTATCAATGCTCATCTCTCATCTCTTCGCTCTCTCCTCCCTAACACTACCAAGTCAGATAAGGCGTCGTTGCTGGCGGAAGTGGTGCAGCATGTACAGCGGTTGAAGAAGGAAGCAGATGATATCGTGAATCGTCACAATGACGGAGAGTCATCGTCTTCATGTAGTGGAGAACCTGGTTCGGTTGATTCTACTGAAGGAGTTGAGACATGGCCGTTTCCGGGGGAATCGGATGAGGCGACGGTGAGTTATTGCGGCGGGGAGAAAGGGGAACCACGGAGAATGAAAGTGACAGTTTGTTGTGAGGACCGGCCTGGTCTGAACAAGGATCTGACACAAGCAATAAGATCGGTTCGGGCGAAACCGGTTCGAGCGGAGATGATGACGGTTGGGGGGAGGACAAAGAGTGTTGTGGTGGTGGAGTGGCTTAAAGGTGAAGGGGGTGGTGATGATGGAAGAGAGGAGAAGGAGGTTGAAGCGTTAGAAAGGGGGTTGAAGGCTGTGATAGAGAATCGGGCTTTTGTGGATTCTGGAATGGGCCCATTTTTTTTGGGCCAGAAACGGGCTCGTGATAGTGGTGAGGTTGATTGTTCCTTGTTGAGGAATGAGGAGTTTTGCTAA 768 0.4896 MLPPLRRFYGFESWLDKDSEKINCEKSKSERKSKEACKSHREAERRRRQRINAHLSSLRSLLPNTTKSDKASLLAEVVQHVQRLKKEADDIVNRHNDGESSSSCSGEPGSVDSTEGVETWPFPGESDEATVSYCGGEKGEPRRMKVTVCCEDRPGLNKDLTQAIRSVRAKPVRAEMMTVGGRTKSVVVVEWLKGEGGGDDGREEKEVEALERGLKAVIENRAFVDSGMGPFFLGQKRARDSGEVDCSLLRNEEFC* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2261 255 MobiDBLite consensus disorder prediction 88 136 - -
Mal8g2261 255 SMART finulus 41 90 IPR011598 GO:0046983
Mal8g2261 255 CDD ACT_UUR-ACR-like 146 218 - -
Mal8g2261 255 PANTHER TRANSCRIPTION FACTOR BHLH30 19 242 IPR045847 GO:0003700|GO:0006355
Mal8g2261 255 MobiDBLite consensus disorder prediction 23 49 - -
Mal8g2261 255 PANTHER OS09G0463900 PROTEIN 19 242 - -
Mal8g2261 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 92 IPR036638 GO:0046983
Mal8g2261 255 MobiDBLite consensus disorder prediction 97 112 - -
Mal8g2261 255 SUPERFAMILY ACT-like 143 218 IPR045865 -
Mal8g2261 255 Gene3D - 28 95 IPR036638 GO:0046983
Mal8g2261 255 Coils Coil 74 94 - -
Mal8g2261 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Mal8g2261 255 Pfam Helix-loop-helix DNA-binding domain 37 84 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2261 Mal-Chr8 48891653 48892545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2261 32 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 46.250 1.91e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal8g2261 HLH 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2261 - - gmx:100816394 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2261 8 48891653 48892545 Mal8g2261 8 48891653 48892545 ECH