Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2260 ATGATGAACCCAACTCGAGTAGAAGCAGAACGGTTACTAGGAATCTCCGAAAAGCTTCTCCAAAACCGAGATCTAATGGGTTCAAAAGAATTCGCAATCTTAGCCCAAGAAACCGAACCTCTTCTAGAAGGTTCCGATCAGATCTTAGCAATCGTCGATGTCCTCGTCGCCTCCGAGAAACGTGTCAACAACAACCCTGATTGGTACTCCATCCTTCAAATCGATCGCCGATCCGACGACCTCGACCTCATCAAGAAACAGTACCGCCGTCTCGCTCTTCTCCTTCACCCCGACAAAAGCCGCTTTCATTTCGCAGATCATGCTTTCAAGCTCGTCGCTGATGCTTGGGCTGTTCTCTCCGATCCGGTAAAGAAAGCTCATTATGATAAAGATTTGTCTTTTTTCGCTCGTGTTGATTTGTCGGTTCCTGGTTGGGTTCAGCAGGATAAGTTACCGGTTCGGAGAACCGGTCCTGTTAATGGGCCGGGGTCTGGCCCCGGCCCACGGAATAGTGCTGCTTCTGCTAGAGAGGAGGTAGCGGCAGATGTTCGTAGGAATGCAACTTTTTGGACTGCGTGTCCTTATTGTTACCGTTTGTATGAGTTTCCAATAGCTTATGAGGGGTTTTGTTTGAGATGTCCTAATTGTGATAGATCATTTCACGGAGTTAATGTTCCGTCTTTGCCACCGTTGGTTCCGGGGAAAGATGCTTATTATTGTTGTTGGGGTTTTTTTCCTATGGGGTTTGTGCTTGGAAATTCTGGTGCTGAGGAGAAAGAGGCTGAGGTTGAGCTGGCGCCGGAGGTTGTGGTGGAGCCGAATGAACCGGTTCCGGTGCCTATATCGGTTCAGTCGGCTTCTTCGCTTCCGAATTGGATGCCTGCGCCGGTTCCTGTGGAGAATGGTGGGAATAATGTAATGCCGGTGACGGCTACGGTTACTACGCCGGCGAGGGTGACTACGAGGTCAGCTGTTGTTCCTGGTGGTGTTCCGAATGGTGTTGCTACGGGTCCCAAGAAGCGTGGAAGGCCAAGGAAGTATTATTGA 1047 0.4986 MMNPTRVEAERLLGISEKLLQNRDLMGSKEFAILAQETEPLLEGSDQILAIVDVLVASEKRVNNNPDWYSILQIDRRSDDLDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWAVLSDPVKKAHYDKDLSFFARVDLSVPGWVQQDKLPVRRTGPVNGPGSGPGPRNSAASAREEVAADVRRNATFWTACPYCYRLYEFPIAYEGFCLRCPNCDRSFHGVNVPSLPPLVPGKDAYYCCWGFFPMGFVLGNSGAEEKEAEVELAPEVVVEPNEPVPVPISVQSASSLPNWMPAPVPVENGGNNVMPVTATVTTPARVTTRSAVVPGGVPNGVATGPKKRGRPRKYY* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2260 348 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 346 - -
Mal8g2260 348 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Mal8g2260 348 Pfam DnaJ domain 67 129 IPR001623 -
Mal8g2260 348 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 346 - -
Mal8g2260 348 SMART dnaj_3 66 124 IPR001623 -
Mal8g2260 348 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Mal8g2260 348 MobiDBLite consensus disorder prediction 323 348 - -
Mal8g2260 348 CDD DnaJ 67 121 IPR001623 -
Mal8g2260 348 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Mal8g2260 348 MobiDBLite consensus disorder prediction 152 175 - -
Mal8g2260 348 Gene3D DnaJ domain 54 138 IPR036869 -
Mal8g2260 348 PRINTS DnaJ domain signature 104 124 IPR001623 -
Mal8g2260 348 PRINTS DnaJ domain signature 69 87 IPR001623 -
Mal8g2260 348 PRINTS DnaJ domain signature 88 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2260 Mal-Chr8 48871212 48872258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2260 3 345 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.191 3.44e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2260 - - gmx:100816918 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2260 8 48871212 48872258 Mal8g2260 8 48871212 48872258 ECH
Mal8g2260 8 48871212 48872258 Mal2g1255 2 15121659 15122339 PCT