Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2256 ATGAAGAACAAATCAAAAGCAAAGATGAGTACTAAATATGCTCAGACCTCTGTTGAGGTTTGTTCAGAGATGAAGGATTCTCAGGTTTCTTCACAAGTGAATGTTTCTCAGGTTTCTTCACAGATGAATGGTTCTCAGCTGAAAACCAAGATTGCTAGGCCACCAGAAAGTGTCAAGGATGTTAATGACAACAAGGACTTGTGGAGGTTGCCTGTTAGGATTGAAGATATGTGGACTGTTCTTAGTATGGATAAAGAAGAAACCGTTGAAATGATCATACTTGATGTCAATGTTACACCAAAGGACTTGCCTGACATCCCTAAGCACAAGTTCAAGTTCAAGGATTTTAAAGAAATCCTGGCTGGAAGCTTTAAGGATGATATAGCTTATGATGTGATTGGACAGCTTTCTGAAATTATCCAGGCTCATGCAAGAACCAAAAAAATCCAAGTTAACTTTACCTTGAAAGATAAAGATGGGATGGTTATTAATTGTACTTTGTGGGAACAATTTGGAGTCAAATTTCTTAACTACAAGAAACAAGTTTCTCAGAGTCTGATTGTGATTGTTATCAAACATGGAAAGATCAAGGAAGCAACTGAAAATGTTTCCCTTCAAAATATAATGGGCACCACTAGGATAATGTTGAATCCAGATATTCCAGAGGCTGTTGGTGATGGAGTTCACCCATCTGTGTTTGATGTTCTAATTGGGAAAGAGCTTCTTTTTAAGGTTGAAAAGAAGTATGTGTCCACCTCTCTTTTTGACAGTTCATTTAGAGTGAAAAGAGCATGTGAAGATTCGACTATCATATCATCGTTTATGTCTGCTGTGGTTGAGGGAAATTCTAATGTTTTGGCAACCAAATTGAATGATGTTAAATCATGCAAGGGGACAACATTCTGGATGGCCCCAGAGGATATGCAGGTTGTGAAAGGAAAGAACAAAGGTTATGGGCTTCCAGCTGATATTTGGAGTCTGGGATGTACTGTGCTGGAGATGCTAACGGGCCAAATTCCATACTCCAATTTGGAACCTGTATGTGTCATATTATTGCTATTTTTTCTCCCATTACCTTTGGCAGGCTACCCATTTTGA 1098 0.3852 MKNKSKAKMSTKYAQTSVEVCSEMKDSQVSSQVNVSQVSSQMNGSQLKTKIARPPESVKDVNDNKDLWRLPVRIEDMWTVLSMDKEETVEMIILDVNVTPKDLPDIPKHKFKFKDFKEILAGSFKDDIAYDVIGQLSEIIQAHARTKKIQVNFTLKDKDGMVINCTLWEQFGVKFLNYKKQVSQSLIVIVIKHGKIKEATENVSLQNIMGTTRIMLNPDIPEAVGDGVHPSVFDVLIGKELLFKVEKKYVSTSLFDSSFRVKRACEDSTIISSFMSAVVEGNSNVLATKLNDVKSCKGTTFWMAPEDMQVVKGKNKGYGLPADIWSLGCTVLEMLTGQIPYSNLEPVCVILLLFFLPLPLAGYPF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2256 365 CDD RPA1_DBD_B_like 131 222 - -
Mal8g2256 365 Gene3D - 104 225 IPR012340 -
Mal8g2256 365 ProSiteProfiles Protein kinase domain profile. 1 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2256 365 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 287 348 - -
Mal8g2256 365 SUPERFAMILY Protein kinase-like (PK-like) 281 359 IPR011009 -
Mal8g2256 365 MobiDBLite consensus disorder prediction 32 50 - -
Mal8g2256 365 Coils Coil 365 365 - -
Mal8g2256 365 Gene3D Transferase(Phosphotransferase) domain 1 281 354 - -
Mal8g2256 365 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 287 348 - -
Mal8g2256 365 Pfam Protein kinase domain 291 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2256 365 MobiDBLite consensus disorder prediction 32 51 - -
Mal8g2256 365 SUPERFAMILY Nucleic acid-binding proteins 111 224 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2256 Mal-Chr8 48694442 48697912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2256 288 359 MAP Kinase Kinase Kinase AT4G08500 64.384 1.05e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal8g2256 Pkinase 3.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2256 - K13414 mtr:MTR_5g053590 117.087