Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2251 ATGGAGAGAAAACATTCTTCTACCAACAACAGCGTCAAGAGGAGGCCTTCTTTCACTGAGCAAGACGCTCTTGTTCTGTACGACGCGAGCACATTGTTGATGTTGTTGCAGGAAGTAGCGAGTAATGCACATTACAAAATTAATTGGAACGAGTTGGTGAAGAAAACTTCGACCGGTATTTCAAGTGCGACAGAGTATCAAATACTTTGGCGTCATTTGGCGTATGGACATTCTTTGATTGATGCTGATTTTGAAGATGATGATCTACCTTTGGATGATGATAGTGACTTGGAATGCGAAAGGGAAACATTACCCATACCCAAACAAACTGCATTGCAAACTGCAGCATGTGTGCAGGTAATGATTGAATCTGTTTCAATGAGCCAATCTACCCCAAATTGCTCATTAATTGAAGCTCCTTTGACTATAACTATTCCATCACATGGTTCATGTAGTACAAGTTCACAACCTTCTAATTTGATAGAAGAGACAAACATTATTTTTCCAGTTATTGTTGAAAGACCAACAAGGATAAATAATATCAATAATGTATCTTCAACAACAAAAGCTATACAAAACAATACATCAAATATTCAAAGGAAAAGAAAATTAGGATATTGGTCTAAGGAAGAGGACATGGAGCTGGAAGCTGCTGTTGAGAAATGGGGTGAAGGAAATTGGACAAATATTGTTGGAAGGGATGATTTTCCTCTTGATCGAACTGCTACACAGTTGTCTAAGAGGTGGAAAATTTTAAGAAATAAAGCTGGCAGCACAAAGTGA 783 0.3793 MERKHSSTNNSVKRRPSFTEQDALVLYDASTLLMLLQEVASNAHYKINWNELVKKTSTGISSATEYQILWRHLAYGHSLIDADFEDDDLPLDDDSDLECERETLPIPKQTALQTAACVQVMIESVSMSQSTPNCSLIEAPLTITIPSHGSCSTSSQPSNLIEETNIIFPVIVERPTRINNINNVSSTTKAIQNNTSNIQRKRKLGYWSKEEDMELEAAVEKWGEGNWTNIVGRDDFPLDRTATQLSKRWKILRNKAGSTK* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2251 260 SMART sant 203 255 IPR001005 -
Mal8g2251 260 Gene3D - 195 258 - -
Mal8g2251 260 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 11 260 - -
Mal8g2251 260 Pfam Myb-like DNA-binding domain 205 250 IPR001005 -
Mal8g2251 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 257 IPR017930 -
Mal8g2251 260 ProSiteProfiles Myb-like domain profile. 199 253 IPR001005 -
Mal8g2251 260 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 11 260 - -
Mal8g2251 260 CDD SANT_TRF 207 254 - -
Mal8g2251 260 SUPERFAMILY Homeodomain-like 202 253 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2251 Mal-Chr8 48637306 48642500 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal8g2251 Myb_DNA-binding 8.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2251 - - cam:101491410 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2251 8 48637306 48642500 Mal2g1268 2 15246404 15253433 PCT