Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2250 ATGAACGAACATCAAAACAAGATGTGTTTTTCAACCGCAACCAACACTGGTTTTCTTCTTGACCCTGCAAAATGTGGTGTGCTGAATTTCCAAGACAAGCAAAGACTTGTCCACGAGGTTGCTCGTCTGTCCAAAGATGCCCCAAATATACTTCAAGCGTTTACTCGCCGGGAACTCCTAGAGTTGATCTGTGCTGAATTAGGCAAAGAACGGAAGTACACGGGATATACGAAGGACCAGATGATAGGATATCTTCTGAAGTTAATTTCTAAGAAATCCAACTTGCACGTCGACCAAAATGCTCTTGTTCATTCTCCTGCCAAAAGTTGCATAGGATCTAAAAGGAAAAAAGAACCTCCATCTCCGGATTTTCGTAATCTTCAACTGGAGAACACGAACGAGGAAACAATGAAATCCTTAGTGTGTCGGAATATTGCATGCAAAGCTACACTGAATCCAGAACATTCGTTTTGCAAGAGATGTTCTTGTTGTATATGCCGTTGTTATGATGATAACAAGGATCCCAGTTTGTGGTTGACCTGCACCTCTGATAATCCGAATGAAGCATCATGTGGAATGTCATGTCATTTGCAATGTGCTTTGAGTAATCTAATGTCTTGCATTTTGAAGGGAAGTTGTGATATAAACTTGGATGGAAGCTTCTATTGTGTTTCTTGTGGAAAAATCAATGACTTAATGAGGACTTGGAGAAAGCAATTATTGGTTGCCAAAGAAGTGAGAAGAGTGGATATACTCTCCTTGCGAATATCCTTGGCCCACAGAATTCTCATAGGAACACAAATCTACAGGGAAGTGCAAAAGATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGACCTCTGGAACATGTATATGCTAGGATGACGCGTGGAATTGTGAGCAGGCTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTACTGCAGTTGAATGTTTTGATTTAAAGTTTTCTGAACACTTTTCTAGTTGTGCAGAAAAGAAAGAAGCACCAACATGCTCTTTACATTTTGAAGAGTGTCTTCCTACCTCAGTGGTCATTGTGCTTGAATACCAAGACAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACAGAATATCATCAACAGACTATCCGGAACAACCCACTTTCATTGTTTTGAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCACACCTGGTACCGAGTACTCTTGCAAGGCTTCTATATTCAGCAGCACAGGGATTTTGGGTGCAGCAGAAGCTAAATGGGTGACACCTTGCGAACAACCTCCAAAAGTTATTGGACATACTGCGAACCATTCAAATGTCGATACATGTGCACAAGACAAAATTAAGATAGCTGCTGAAAAACACATGCTTTTAAACATCAGGAACAGGTTTGAAGAGTTTCCCACCAAGCCTCCAACAATAGAACCGTTTCCATGTAAAAGTTTTGCAGCAGTTCCACCTGCCACACCTTCTAAATCCAATGAAATGAGACAAATGACTGGTTTCAATTCTAGAAAGCGCGCGAAGGAAAATGATTATGAGTATTCTGTACGGGTAGTCAAATGGTTAGAGCATGAAGGGCACATAGATGAAGTCTTCAGAGTGAAGTTTCTCACTTGGTTCAGTCTCAAGGCAAATCAGCAAGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCACTGATTGATGATCCTGCAAGCTTAGCAGACCAGCTAATACACACTTTCACCGATGAGATTTGTTGCGACCAAAAATCTTAG 1782 0.4119 MNEHQNKMCFSTATNTGFLLDPAKCGVLNFQDKQRLVHEVARLSKDAPNILQAFTRRELLELICAELGKERKYTGYTKDQMIGYLLKLISKKSNLHVDQNALVHSPAKSCIGSKRKKEPPSPDFRNLQLENTNEETMKSLVCRNIACKATLNPEHSFCKRCSCCICRCYDDNKDPSLWLTCTSDNPNEASCGMSCHLQCALSNLMSCILKGSCDINLDGSFYCVSCGKINDLMRTWRKQLLVAKEVRRVDILSLRISLAHRILIGTQIYREVQKIVETALKLLENEVGPLEHVYARMTRGIVSRLSCGAEVQKLCSTAVECFDLKFSEHFSSCAEKKEAPTCSLHFEECLPTSVVIVLEYQDKLLKNFLGCRLWHRISSTDYPEQPTFIVLRPEKRFKLENLTPGTEYSCKASIFSSTGILGAAEAKWVTPCEQPPKVIGHTANHSNVDTCAQDKIKIAAEKHMLLNIRNRFEEFPTKPPTIEPFPCKSFAAVPPATPSKSNEMRQMTGFNSRKRAKENDYEYSVRVVKWLEHEGHIDEVFRVKFLTWFSLKANQQERRVVSAFVDALIDDPASLADQLIHTFTDEICCDQKS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2250 593 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Mal8g2250 593 PANTHER OS08G0220600 PROTEIN 11 593 - -
Mal8g2250 593 PANTHER VIN3-LIKE PROTEIN 2-RELATED 11 593 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2250 Mal-Chr8 48615428 48619802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2250 17 430 PHD Gene Family AT4G30200 38.210 1.97e-79 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2250 - - gmx:100785502 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2250 8 48615428 48619802 Mal8g2250 8 48615428 48619802 ECH