Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2244 ATGGATTGGAAGATTCTAGAAATTGCAACTTCTTCATGTTCTTGTGAAGAAGATATTGAAGAGAGTAATGATGAGGGTGAAGGTTGCAATTTTAAAGATGAATTTGAAGTAATGCGATATCATTTTCCAGATCGCGAAGTTGTCTTTATGTTCTATAATTGGTATGCTTGTTTTCATGGATTTGCTCCTAGAAAGAGTAGAGTCATTAGAAATATTAAAGGTGAAGTGGTACAACAAACATTTCTTTGTCATAGGGAAGGCATTAGAGAGGAAAAATACATCAATTCAACATCTCGTAAGAGAGAGCACAAACCGTTGAGTAGGTGTGGATGTCAAGCTAAAGTAAAAGTTCACCTTGATATTAGTTGCGATCGTTGGTACATTAAACTTTTTGATGATGACCACAACCATTCTTTTGTTAAGGAAAAGTTTGAGGGGATGCTTCCTGCACATAGAAAGATGAGTGAGTATGACAAATACCAGATGAACACAATGAGGAAATCAGGAATTCCAACCACACGAATTTATGGTTATTTTGCGGAACAAGCTGGTGGGTATGAAAAACTTGGTTACTCCAAAATAGACATGTATAATGAGCAATTCAAGAGAATGAGGTATAGGAATTCTGATGCTGAAGAAGCAGTAGAGTTTTTGAAGGCTATGTCATCGCGGGATGATAAGATGTTTTGGAGGCACACAGTAAATGCTGATGGAACACTCCAACATTTGTTTTGGTGTGATGGTGTCAGTCGCATGGACTACTCGGTTTTTGGTGATGTGTTAGCATTCGATGCAACATATAGGAAAATAAAATACAATACACCGTTAGTCATATTCTCTGGAGTAAACCATCATAATCAGAGCATTATTTTTGGTAGTGCAATTGTGGGTGATGAAACTGAAGACTCGTATGTTTGGATTTTGGAAAAATTTGTTGAAGCGATGGGAGGGAAACTTCCAGTGTCTGTTATTACGGATGGAGATTTAGCGATGAGAAATGCAATAAGATGGATTTTTCCAAAAGCTCATCACCGTCTCTGTGCTTGGCATCTGATACGGAATGCTACTAGTAACATAAAAAATCTTCAATTTGTTTCGAAATTTAAACGTTGCATGTTAGATGATGTGGATGTTGATGTGTTTGAGCTTAAGTGGGAAGAACTAGTTAGAGAGTTTGGCTTGGAAGGTAACCCCTGGATGTTGGAGATGTATCAAAAGCGGAAGATGTGGGCTACTGCTCATATTCGTGGCAACTTTTTTGCGGGTTTTAGAACTACTTCTCGTTGTGAAAGTTTGCATTCTAAATTTGGAAAATATGTGTCAGTTCTTTCCAACTTGTTATATTTTTTACAACAATATTTCATAGAGGCTGATTTTTTATCTTCTCATGGTGATGTTGTCCTTCAAACCCAACACTCACATCTAGAAAGATCAGCTTTTAAGGTGTACACAAAGGCAATATTTAGGCTAGTTAGACCCGTGTTGGAAAGAGCTTGTCGTTGTAAGGTAGAGAATGTATCACAAAATGGTTCCATATTTGACTACACTGTGCGTAAATATCCTAGACAATATATTGAATGGATTGTCTCATTTTGTCAACATAGACTTGTCTTTGAATGTACTTGTAGGAGGTTAGAGACATTAGGCATTGCTTGTGAACATGTGATGGCTGTTTTGATATTTTTGAACATTGTAAACCTTCCTGATTGTCTAGTGTTGCATAGATGGACCAAATCTGCTAAAGATGTAGTTAACGCGTCGAATGCTAATAGTTCAAGTCAGAGGAACCCGACTTTTATAACTACATACGTTACATTTGTAGAGAGATGTAAGAGGATGGTTAATGCAGCATTGTGTTGTGGTAAGCCAGAATTTTTGCGTGGTTGTATTGAAATGGTTGAGACACAGAAAGGATTGTTGGAGGCGGTTGGTAGGGGTGAAGATGTTCCCATGTCTGAATTGGGTACACAAACAGAAGTTTCGTTACGTAATCCACCTCGGGTGAGGAGAAAGGGTGGTGGAGGAGCATCATCCTCAGTGTTAGGAACTGGAAAATCAGCTCGTAGGACAAATAAGTGTGGAATTTGCGGAACATTGGGTCATAACCACCAATCGTGTCATCTACGGGGAGAGACACTTCTTCAATCTCAAAGTAATTACATAGAGTCATTTAATTATGGGGATGAAGACGAGGATGGTTGTAACGTCTTCATGGATGTTAACTGA 2226 0.3823 MDWKILEIATSSCSCEEDIEESNDEGEGCNFKDEFEVMRYHFPDREVVFMFYNWYACFHGFAPRKSRVIRNIKGEVVQQTFLCHREGIREEKYINSTSRKREHKPLSRCGCQAKVKVHLDISCDRWYIKLFDDDHNHSFVKEKFEGMLPAHRKMSEYDKYQMNTMRKSGIPTTRIYGYFAEQAGGYEKLGYSKIDMYNEQFKRMRYRNSDAEEAVEFLKAMSSRDDKMFWRHTVNADGTLQHLFWCDGVSRMDYSVFGDVLAFDATYRKIKYNTPLVIFSGVNHHNQSIIFGSAIVGDETEDSYVWILEKFVEAMGGKLPVSVITDGDLAMRNAIRWIFPKAHHRLCAWHLIRNATSNIKNLQFVSKFKRCMLDDVDVDVFELKWEELVREFGLEGNPWMLEMYQKRKMWATAHIRGNFFAGFRTTSRCESLHSKFGKYVSVLSNLLYFLQQYFIEADFLSSHGDVVLQTQHSHLERSAFKVYTKAIFRLVRPVLERACRCKVENVSQNGSIFDYTVRKYPRQYIEWIVSFCQHRLVFECTCRRLETLGIACEHVMAVLIFLNIVNLPDCLVLHRWTKSAKDVVNASNANSSSQRNPTFITTYVTFVERCKRMVNAALCCGKPEFLRGCIEMVETQKGLLEAVGRGEDVPMSELGTQTEVSLRNPPRVRRKGGGGASSSVLGTGKSARRTNKCGICGTLGHNHQSCHLRGETLLQSQSNYIESFNYGDEDEDGCNVFMDVN* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2244 741 SMART 26again6 538 565 IPR006564 GO:0008270
Mal8g2244 741 MobiDBLite consensus disorder prediction 657 685 - -
Mal8g2244 741 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 594 IPR031052 GO:0006355
Mal8g2244 741 Pfam FAR1 DNA-binding domain 51 140 IPR004330 -
Mal8g2244 741 ProSiteProfiles Zinc finger SWIM-type profile. 525 563 IPR007527 GO:0008270
Mal8g2244 741 PANTHER OS02G0262500 PROTEIN 37 594 - -
Mal8g2244 741 Pfam MULE transposase domain 260 354 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2244 Mal-Chr8 48553038 48555802 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal8g2244 MULE 7.4e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2244 - - ccaj:109791994 593.193