Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2226 ATGGCTGGAACTAGTTCTCATGTCAATGTTTCGGATGGTAGAAAGGTGTTACCTGTTGGGTTTGTGCTAGATCCAAGTGATCGTGAGTTTGTTGAAAATTTTCTGGCAAGGAAAGCGTTCAAGGAACCTATTTCATTTCCCCCGTTGCAAGTTGATGTCTTTCAAGCTGAGCCATGGAGGCTGCACCTAGAAAGTAGAACTGCTTTGAAGACAATGAGGTATTATTTCTCTGATTACATGCTCCATGAGTTCGAGCATCGAGATATAAGACCAGCCGGAAATGGTGATTGGAGAGCATTGACACAGGGCGAGGATATTCATATTTCAATCAACAACTTCATTGGGAAAAAGAGGACATTAGCTTACTGGACAATGAAAGGAAATGAAGTTGTGCTGACACCATGGAGGATGGATGAATTTGGGATCATGTCCAAAAGTTGTTGTATACTTGTGATGTAA 459 0.4161 MAGTSSHVNVSDGRKVLPVGFVLDPSDREFVENFLARKAFKEPISFPPLQVDVFQAEPWRLHLESRTALKTMRYYFSDYMLHEFEHRDIRPAGNGDWRALTQGEDIHISINNFIGKKRTLAYWTMKGNEVVLTPWRMDEFGIMSKSCCILVM* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2226 152 Gene3D NAC domain 26 147 IPR036093 GO:0003677|GO:0006355
Mal8g2226 152 SUPERFAMILY NAC domain 7 146 IPR036093 GO:0003677|GO:0006355
Mal8g2226 152 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 141 - -
Mal8g2226 152 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 141 - -
Mal8g2226 152 Pfam No apical meristem (NAM) protein 18 141 IPR003441 GO:0003677|GO:0006355
Mal8g2226 152 ProSiteProfiles NAC domain profile. 17 152 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2226 17 144 NAC Transcription Factor Family AT5G63790 29.771 6.64e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal8g2226 NAM 3.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2226 - - cam:101501671 102.449