Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2197 ATGGTGTTAAGGAAAGTAGGTAAGTATGAAATTGGAAGAACAATTGGTGAAGGAACATTCGCGAAGGTTAAATTTGCTCAGAATACTGAAACTGGTGAAAGCGTTGCTATGAAGATTCTCGATCGTAGCACCATCATCAAGCATAAAATGGCCGATCAAATCAAGAGGGAGATTTCTATTATGAAGCTAGTAAGACATCCATATGTTGTTCGCCTGCATGAGGTTCTGGCAAGCCGTACTAAGATTTATATCATATTGGAGTTCATCACAGGTGGTGAATTGTTTGATAAAATTGTACATCACGGGCGTCTTAATGAAGCTGAAGCTAGGAGATACTTCCAACAGCTTATCGATGGTGTAGATTATTGCCACAGTAAGGGAGTTTATCATAGAGATTTAAAGCCTGAAAACCTTTTACTTGATTCACTAGGAAATATGAAGATTTCAGATTTTGGTTTGAGTGCTTTGCCAGAACAAGGGGTTACCATGCTGCGGACAACTTGTGGAACTCCTAATTATGTAGCTCCTGAGGTACTCAGTCACAAAGGTTATAATGGTGCTCCTGCAGATGTTTGGTCCTGTGGCGTTATCCTCTATGTTCTAATGGCTGGGTATCTTCCCTTTGATGAGCTTGATCTAACCACGTTATACAGTAAGATTGACAAAGCAGAGTTTTCATGCCCTGCTTGGTTTCCTGTGGGAGCGAAATCTTTGATACAGAGAATTTTGGACCCAAACCCTGAACATGATCAGACTGCTAATCCGCAATGTGAGATTGAGGACACGGGTCCTCTAATTCTTAATGCATTCGACATGATAATGTTATCTCAAGGCTTAAACCTTGCAACAATCTTTGATCGTGGACAGGACACTATGAAGTATCAAACGCGCTTCATCACTCAAAAGCCAGCAAAAGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACGCATATTCGTAACTATAAGATGAGAATAGAAGGTATTTCAGCAAATAAGAAATCTCATTTCTCAGTTATATTGGAAGTTTTTGAAGTTGCTCCCACATTTTTTATGGTGGACATTCAGAAAGCAGCTGGCGATTCTAGTGAATATCTCAAGTTTTACAAGAATTTTTCTAGTAATCTTGAGGATATCATCTGGAAATCACCTCATGAAACAAGCAAATTGAAGACCTCCAAGACTAGAATCAAAAGACATTAG 1218 0.3916 MVLRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKILDRSTIIKHKMADQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRLNEAEARRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNMKISDFGLSALPEQGVTMLRTTCGTPNYVAPEVLSHKGYNGAPADVWSCGVILYVLMAGYLPFDELDLTTLYSKIDKAEFSCPAWFPVGAKSLIQRILDPNPEHDQTANPQCEIEDTGPLILNAFDMIMLSQGLNLATIFDRGQDTMKYQTRFITQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRIEGISANKKSHFSVILEVFEVAPTFFMVDIQKAAGDSSEYLKFYKNFSSNLEDIIWKSPHETSKLKTSKTRIKRH* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2197 405 SUPERFAMILY Protein kinase-like (PK-like) 6 252 IPR011009 -
Mal8g2197 405 Pfam Protein kinase domain 9 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2197 405 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 249 401 - -
Mal8g2197 405 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 250 - -
Mal8g2197 405 PANTHER - 249 401 - -
Mal8g2197 405 PANTHER - 2 250 - -
Mal8g2197 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Mal8g2197 405 Gene3D Transferase(Phosphotransferase) domain 1 4 265 - -
Mal8g2197 405 ProSiteProfiles Protein kinase domain profile. 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2197 405 SMART serkin_6 9 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2197 405 CDD CIPK_C 268 383 - -
Mal8g2197 405 Pfam NAF domain 264 322 IPR004041 GO:0007165
Mal8g2197 405 Gene3D Kinase associated domain 1, KA1 266 387 - -
Mal8g2197 405 ProSiteProfiles NAF domain profile. 262 286 IPR018451 GO:0007165
Mal8g2197 405 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2197 Mal-Chr8 46862502 46870967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2197 1 347 CBL-interacting serine-threonine protein kinases AT4G24400 76.227 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal8g2197 Pkinase 4.5e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2197 8 46862502 46870967 Mal8g2197 8 46862502 46870967 ECH