Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2196 ATGGAGCTTCAATCCTTCAATTCCCATCCAAATTCCGGCAATTCCTCACCCACCTATCGTGAATTGCTCGACAACGATCACCACCGTTCATTCTTCGACGAACCACCACCTTCCAACGGTCCCAGAATCAAACTCATGATTCGTTACGGCGGAAAAATCAAACCTAGGCTTAACGGTCATCATCACTATTCCTACTTCGGCGGTGACACCAAAATCCTCATCGTCGATCGTAATGTCAAATTCTCCAACCTCATCGCGAAGCTTTGTTCAATGACGTTTTCTGAGGTTTGCTTGAAGTATCAACTTCTCGGTGAAGATCTCGACACTTTGATTTCGGTTTACAACGATGAAGATCTCGATAATATGATTTTCGAGTATGATCGTTTGTGTCGTGTTTCGAAAACTCCAAGATTGAAGGTTTTTCTCTTCCCTATCAACAACAAAAACAATGCATCTTCTGATTCTGATTCTGATTCTGAATCTTTGCGTTCTGCTATCAATTTCGCCGTGGGGAAAGATTCGAAATCGAACGAACAGTGGTTCATCGACATGCTGAATTCCGCTCGTTCTCCTCCGTCACCTCCGCCGGTGGAAGATTCACCTCCGCCTCCGACTCTGGAAGATTCACCTCCACCTCCTTCGAAGGCGATGACGAATCCAGATTATCTGTTTGGATTAGATAAGACTCCGTCCGCGTCTCCCGCGGCGAATCAGGCGGAATTGCCGGTAACTGTTCCGGATTTCGAGGCGAAGGATACGGAGTGTGAGACCGAAACGGTTACAGAAAGAGAGATTCAGGAAGTTCAGATAATGCATGCTGTGAATGATGAACAGAACGTGAAAATTGACGGAGATAACGGCGGTGTTAACGGTGATGATGAACAGCAAGTGAAAAAAATTGACGGAGAAAACGGTTGTGATGAACAGAAAGTGAAAGTTGACGGAGAAAACGACGGAATTAACGGTAGTGTTGAAGATTACTCTGAAGAAAACGCGGAAAAAGTGATTACGTTAGTTACTGATGAAGCTGCTCAGGATCCGGTTCAAGTTCATACCGGTTCGTTTCACTCCTGTTCGGTTCAAGTTCCTGAACCGGTTTCGGTTCAGTTATCCTATACTCAAGAAACTTATAATGTGGTTGCTGGTGGTGGTTATTCGATGGGGTATACAACTGAACCGCCACCGGCTTTACCCGTTTATTTGGTTCAAACACCTTCTGGATTATACCAAGCTGTGAGGCCGATTACCGGACCAACCGGTCAACCGGTTTATTTTGCGTATTCGCCGATTGTGAACAATGGTGGTGGATATTCTCCTGGTTCGTATGTGCCTAACAGATCAGCTTTGCCGTTGTAG 1356 0.4543 MELQSFNSHPNSGNSSPTYRELLDNDHHRSFFDEPPPSNGPRIKLMIRYGGKIKPRLNGHHHYSYFGGDTKILIVDRNVKFSNLIAKLCSMTFSEVCLKYQLLGEDLDTLISVYNDEDLDNMIFEYDRLCRVSKTPRLKVFLFPINNKNNASSDSDSDSESLRSAINFAVGKDSKSNEQWFIDMLNSARSPPSPPPVEDSPPPPTLEDSPPPPSKAMTNPDYLFGLDKTPSASPAANQAELPVTVPDFEAKDTECETETVTEREIQEVQIMHAVNDEQNVKIDGDNGGVNGDDEQQVKKIDGENGCDEQKVKVDGENDGINGSVEDYSEENAEKVITLVTDEAAQDPVQVHTGSFHSCSVQVPEPVSVQLSYTQETYNVVAGGGYSMGYTTEPPPALPVYLVQTPSGLYQAVRPITGPTGQPVYFAYSPIVNNGGGYSPGSYVPNRSALPL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2196 451 Pfam PB1 domain 65 143 IPR000270 GO:0005515
Mal8g2196 451 MobiDBLite consensus disorder prediction 1 20 - -
Mal8g2196 451 MobiDBLite consensus disorder prediction 189 217 - -
Mal8g2196 451 CDD PB1_UP2 46 143 - -
Mal8g2196 451 PANTHER OS05G0427100 PROTEIN-RELATED 1 427 - -
Mal8g2196 451 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 427 - -
Mal8g2196 451 SUPERFAMILY CAD & PB1 domains 63 153 - -
Mal8g2196 451 MobiDBLite consensus disorder prediction 186 240 - -
Mal8g2196 451 Gene3D - 64 144 - -
Mal8g2196 451 SMART PB1_new 50 145 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2196 Mal-Chr8 46851141 46852496 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2196 42 160 MAP Kinase Kinase Kinase AT1G79570 36.066 5.41e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2196 - - cam:101512371 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2196 8 46851141 46852496 Mal8g2196 8 46851141 46852496 ECH