Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2194 ATGGAGCAACCACCTTCCAATGGTTCCAAAGTCATACTCATGATTTACTATGGTGGAACAATCCAACCTAGGCTTCGCCGTCACGGTCATAGCTATTCATACATCGGTGGTGTCAAGAAAATCCTCATTGTTGATCGTAATATCAAATTCACCAACCTCATTCGAGAGTTTTCTTCAATGGCATTTTCTGATGTTTGCTTCAAGTATCAATATCCTGGTGAAGATCTTGATAGTTTAATCTCGGTCTATAACGAAGAAGATCTTGATCATATGATGTTCGAGTACGATCATTTGTGTCGCATTTCACCAGAGTCTGCTAGGTTGCGGGTGTTCCTCTTCCCTGTCCCGGATAACAACAATGATGTATCTTCTGATTCTTTGGCTTCCGCTATGAATCTCGAACAGTTCGTCGACTTGCTCAATTCCGTTTATGTTTCACCTTTGGAAGATTCATCTCCTCCATATTGGGAAGATGTATATCCGCTTCCTCCACCTCCTCCAAAGAAAAATTCATCTCCTCCTACTCCGCCATTGGAAGATTTAACTCCGCCTCCACCTCCGCCGTCGAAGAATGCGGTTAAAAAAACTGAGATGAGCAAGGAATTTCATGAACTGAATATTATGAATGATGGATTCGACAAGATTCTAAAATATGTTATGAAGTGCTTTAAAAGTGTAGCTAATTAA 687 0.4076 MEQPPSNGSKVILMIYYGGTIQPRLRRHGHSYSYIGGVKKILIVDRNIKFTNLIREFSSMAFSDVCFKYQYPGEDLDSLISVYNEEDLDHMMFEYDHLCRISPESARLRVFLFPVPDNNNDVSSDSLASAMNLEQFVDLLNSVYVSPLEDSSPPYWEDVYPLPPPPPKKNSSPPTPPLEDLTPPPPPPSKNAVKKTEMSKEFHELNIMNDGFDKILKYVMKCFKSVAN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2194 228 Pfam PB1 domain 33 114 IPR000270 GO:0005515
Mal8g2194 228 SMART PB1_new 27 115 IPR000270 GO:0005515
Mal8g2194 228 MobiDBLite consensus disorder prediction 157 191 - -
Mal8g2194 228 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 186 - -
Mal8g2194 228 MobiDBLite consensus disorder prediction 156 197 - -
Mal8g2194 228 CDD PB1_UP2 17 113 - -
Mal8g2194 228 SUPERFAMILY CAD & PB1 domains 32 119 - -
Mal8g2194 228 Gene3D - 33 114 - -
Mal8g2194 228 PANTHER OS05G0427100 PROTEIN-RELATED 9 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2194 Mal-Chr8 46809897 46810583 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2194 10 146 MAP Kinase Kinase Kinase AT3G46920 35.616 1.04e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2194 - - mtr:MTR_5g088590 184.882