Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2191 ATGGAGCACCCACCTTCCAACGGTTCTAGAGTCGTACTCATAGTTAGCTATGGTGGAACAATCCAACCTAGACTAAACGATCATAGCTATTCATACATCGGCGGCGACACAAGACTCCTCATTGTCGATCGTAATATCAAATTGTCCAACCTTATTGGAAAGTTTTCTTCAATGACGTTTTCTGATGTTTGCTTCAAGTATCAATGTCCTGGTGAAGATCTTAATACTTTGATCCCGGTCTATAACGAAGAAGATCTTGATGATATGATGTTCGATTACGATGATTTGTGCCGCGTTTCACCAAATTCTGCAAGGTTGAGGGTGTTCCTCTTCCCTGTCCCGGATAACAACAATGCATCTTCTGGTTCATCTCCTCCTCCGCCGTCGAAGAAAGCGGTTAAAATAACTATGAGCAAGGAATTTCAGGAACTGAATATTGTGAATGATGGATTCGACATGATTCTAAAATGTGTTAAGGAGTGCTTTAAAAGTGTAGTTAATTAA 504 0.4048 MEHPPSNGSRVVLIVSYGGTIQPRLNDHSYSYIGGDTRLLIVDRNIKLSNLIGKFSSMTFSDVCFKYQCPGEDLNTLIPVYNEEDLDDMMFDYDDLCRVSPNSARLRVFLFPVPDNNNASSGSSPPPPSKKAVKITMSKEFQELNIVNDGFDMILKCVKECFKSVVN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2191 167 CDD PB1_UP2 14 111 - -
Mal8g2191 167 SUPERFAMILY CAD & PB1 domains 27 121 - -
Mal8g2191 167 SMART PB1_new 25 113 IPR000270 GO:0005515
Mal8g2191 167 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 127 - -
Mal8g2191 167 PANTHER OS05G0427100 PROTEIN-RELATED 9 127 - -
Mal8g2191 167 Gene3D - 31 112 - -
Mal8g2191 167 Pfam PB1 domain 30 112 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2191 Mal-Chr8 46786646 46787149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2191 10 119 MAP Kinase Kinase Kinase AT5G57610 37.273 2.00e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2191 - - mtr:MTR_5g067200 147.517