Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2190 ATGGGGCACTCACCTTCCAACGATTCTAGAGTCATACTCATAGTTAGCTATGGTGGAACAATCCAACCTAGACTTCACGGTCATAGCTATTCATACATCGGCGGTGACACCAAACTCCTCATTGTCGATCGTAATATCAAATTGTCCAATCTTATTTGGAAGCTTTCTTCGATGACGTTTTCTGATGTTTGCTTCAAGTATCAATATCCTGGTGAAGATCTTGATACTTTGATCTCGGTCTATAACGAAGAAGATCTTGATCATATGATGTTCGAGTATGATCGTTTGTGCCGCATTTCACCAAATTCTGCAAGGTTGAGGGTGTTCCTCTTCCCTGTCCCGGATAACAACAATGCATCTTCTGATTCTTTGGCTTCCACTATGAATCTCAAACAGGTGTTCGTCGACTTGCTCAATTCCGTTTATGTTTCGCCTTTTGAATCTCCTCCGCCTTGGGAAGATTTACGTCCGCTTCCTCCGCGTCCTCCAAAGAAAGATTCATCTCCTCCTACTCCGCCGTTGGAAGATTTAACTCCGCCTCCACCTCCACCTCCACCGTCGAAGAATGCAATTAAAAGAACTGAGATCAGTAAGGAATTTCAGGAACTGAATATTATAACTGATGGATTCGACAAGATTCTAAAATATTTTTCAAACTGCTTTGAAAGCGTAGTTAATTAA 681 0.4185 MGHSPSNDSRVILIVSYGGTIQPRLHGHSYSYIGGDTKLLIVDRNIKLSNLIWKLSSMTFSDVCFKYQYPGEDLDTLISVYNEEDLDHMMFEYDRLCRISPNSARLRVFLFPVPDNNNASSDSLASTMNLKQVFVDLLNSVYVSPFESPPPWEDLRPLPPRPPKKDSSPPTPPLEDLTPPPPPPPPSKNAIKRTEISKEFQELNIITDGFDKILKYFSNCFESVVN* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2190 226 CDD PB1_UP2 14 111 - -
Mal8g2190 226 Gene3D - 31 112 - -
Mal8g2190 226 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 182 - -
Mal8g2190 226 MobiDBLite consensus disorder prediction 147 192 - -
Mal8g2190 226 SUPERFAMILY CAD & PB1 domains 30 121 - -
Mal8g2190 226 SMART PB1_new 25 113 IPR000270 GO:0005515
Mal8g2190 226 Pfam PB1 domain 31 112 IPR000270 GO:0005515
Mal8g2190 226 PANTHER OS05G0427100 PROTEIN-RELATED 9 182 - -
Mal8g2190 226 MobiDBLite consensus disorder prediction 150 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2190 Mal-Chr8 46756901 46757581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2190 10 119 MAP Kinase Kinase Kinase AT5G57610 38.182 6.59e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2190 - - cam:101512371 174.096